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https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-17 05:47:58 +08:00
binary wire format with flatbuffers (#509)
* first flatbuffer schema * do not lint auto-generated files * add flatbuffers package * add flatbuffer module * wire up /data/X/T route * use flatbuffers for matrix data fetc * clarity and comments * add flatbuffer layout route * clean up obsolete code * fix tests * move flake8 config to setup.cfg * add comments * lint * rework layout routes for fbs * add more type support to fbs * lint * add flatbuffer support for annotations * function name improvements * fix botched merge with master * remove unused import * route cleanup for flatbuffers * rename function for clarity * add missing globals to Jest tests * fix client JS tests * fix routes for Python tests * comments for clarity * non-finite floating point hardening * more non-finite number handling * lint * fix tests for summarizeAnnotations * harden diffexp calculation against FP errors * cleanup unused code * lint * add encoding tests for flatbuffers * application type specified as strings * fix spelling error * improve variable names * add note about documentation gap * rename FBS DataFrame to Matrix
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@@ -20,6 +20,7 @@ import scaleLinear from "../../util/scaleLinear";
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import { margin, width, height } from "./util";
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import { kvCache } from "../../util/stateManager";
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import finiteExtent from "../../util/finiteExtent";
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@connect(state => {
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const {
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@@ -227,11 +228,11 @@ class Scatterplot extends React.Component {
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static setupScales(expressionX, expressionY) {
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const xScale = d3
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.scaleLinear()
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.domain(d3.extent(expressionX))
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.domain(finiteExtent(expressionX))
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.range([0, width]);
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const yScale = d3
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.scaleLinear()
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.domain(d3.extent(expressionY))
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.domain(finiteExtent(expressionY))
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.range([height, 0]);
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return {
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