From bb3032ea2f101a15c8aac6970b02dd725509c4e1 Mon Sep 17 00:00:00 2001 From: Sidney Bell Date: Tue, 26 Nov 2019 12:57:50 -0800 Subject: [PATCH] Update getting started docs w/ direct url launch --- docs/index.md | 12 +++--------- 1 file changed, 3 insertions(+), 9 deletions(-) diff --git a/docs/index.md b/docs/index.md index a80dbeb4..9afd0e61 100644 --- a/docs/index.md +++ b/docs/index.md @@ -7,23 +7,17 @@ layout: default Whether you need to visualize one thousand cells or one million, cellxgene helps you gain insight into your single-cell data. -To install cellxgene you need Python 3.6+. We recommend [installing cellxgene into a conda or virtual environment.](/faq.html#how-do-i-create-a-python-environment-for-cellxgene) +To install cellxgene you need Python 3.6+. We recommend [installing cellxgene into a conda or virtual environment.](install) Install the package. ``` bash pip install cellxgene ``` -Download an example [anndata](https://anndata.readthedocs.io/en/latest/) file +Launch cellxgene with an example [anndata](https://anndata.readthedocs.io/en/latest/) file ``` bash -curl -o tabula-muris.h5ad https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip -unzip tabula-muris.h5ad.zip -``` - -Launch cellxgene -``` bash -cellxgene launch tabula-muris.h5ad --open +cellxgene launch https://cellxgene-example-data.czi.technology/pbmc3k.h5ad ``` To explore more datasets already formatted for cellxgene, check out the [Demo data](demo-data) or