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Add user-generated annotations tests to the server (#1164)

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* Add user-generated annotations tests to the server

Partially completes https://github.com/chanzuckerberg/cellxgene/issues/969

* Auto-format python code

* @skip_if: passing lambdas > than property strings

* Respond to feedback from @bkmartinjr
This commit is contained in:
Matt Weiden
2020-02-23 15:32:13 -08:00
committed by GitHub
parent fb1f0c6469
commit c7f2032dd7
65 changed files with 377 additions and 223 deletions
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server/cli/upgrade.py
+5 -4
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@@ -20,7 +20,7 @@ def log_upgrade_check():
# Get the current latest release
try:
release_tag_generator = (r['tag_name'] for r in _request_cellxgene_releases())
release_tag_generator = (r["tag_name"] for r in _request_cellxgene_releases())
latest_release = next(release_tag_generator, lambda tag_name: validate_version_str(tag_name))
if version_gt(latest_release, __version__):
click.echo(f"There's a new version of cellxgene available ({latest_release})!")
@@ -37,15 +37,16 @@ class RateLimitException(Exception):
def _request_cellxgene_releases():
def raise_on_rate_limit(response):
if response.status_code == 403 and res.headers.get('X-RateLimit-Remaining') == '0':
if response.status_code == 403 and res.headers.get("X-RateLimit-Remaining") == "0":
raise RateLimitException
url = "https://api.github.com/repos/chanzuckerberg/cellxgene/releases"
res = requests.get(url)
raise_on_rate_limit(res)
for release in res.json():
yield release
while 'next' in res.links.keys():
res = requests.get(res.links['next']['url'])
while "next" in res.links.keys():
res = requests.get(res.links["next"]["url"])
raise_on_rate_limit(res)
for release in res.json():
yield release