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https://github.com/chanzuckerberg/cellxgene.git
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Style guide cleanup
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@@ -2,7 +2,6 @@ from abc import ABCMeta, abstractmethod
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class CXGDriver(metaclass=ABCMeta):
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def __init__(self, data, schema=None, graph_method=None, diffexp_method=None):
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self.data = self._load_data(data)
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@@ -51,10 +50,8 @@ class CXGDriver(metaclass=ABCMeta):
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:param fields: list of keys for metadata to return, returns all metadata values if not set.
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:return: Iterator for cellid + list of cells metadata values ex. [cell-id, val1, val2, val3]
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"""
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pass
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@abstractmethod
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def create_graph(self, df):
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"""
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@@ -64,7 +61,6 @@ class CXGDriver(metaclass=ABCMeta):
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"""
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pass
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@abstractmethod
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def diffexp(self, df1, df2):
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"""
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@@ -72,7 +68,8 @@ class CXGDriver(metaclass=ABCMeta):
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:param df1: First set of cells
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:param df2: Second set of cells
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:return: Up in the air: I recommend [gene name, mean_expression_cells1, mean_expression_cells2, average_difference, statistic_value]
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:return: Up in the air: I recommend [gene name, mean_expression_cells1,
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mean_expression_cells2, average_difference, statistic_value]
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"""
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pass
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