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[EASY] fix max-category-items (#813)

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* fix max-category-items

* match default for max category items

fe had 1000, be had 100
This commit is contained in:
Charlotte Weaver
2019-06-13 15:45:43 -07:00
committed by GitHub
parent 334b8bb8da
commit d5deb1579f
3 changed files with 3 additions and 5 deletions
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server/app/rest_api/rest.py
+1 -1
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@@ -63,7 +63,7 @@ class ConfigAPI(Resource):
"dataset": current_app.config["DATASET_TITLE"], "dataset": current_app.config["DATASET_TITLE"],
}, },
"parameters": { "parameters": {
"max_category_items": current_app.data.config["max_category_items"] "max-category-items": current_app.data.config["max_category_items"]
}, },
"library_versions": { "library_versions": {
"scanpy": pkg_resources.get_distribution("scanpy").version, "scanpy": pkg_resources.get_distribution("scanpy").version,
server/cli/launch.py
+2 -2
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@@ -62,10 +62,10 @@ BIG_FILE_SIZE_THRESHOLD = 100 * 2**20 # 100MB
@click.option("--host", default="127.0.0.1", help="Host IP address") @click.option("--host", default="127.0.0.1", help="Host IP address")
@click.option( @click.option(
"--max-category-items", "--max-category-items",
default=100, default=1000,
metavar="", metavar="",
show_default=True, show_default=True,
help="Limits the number of categorical annotation items displayed.", help="Categories with more distinct values than this will not be displayed.",
) )
@click.option( @click.option(
"--diffexp-lfc-cutoff", "--diffexp-lfc-cutoff",
server/test/test_scanpy_engine.py
-2
View File
@@ -78,8 +78,6 @@ class EngineTest(unittest.TestCase):
def test_schema(self): def test_schema(self):
with open(path.join(path.dirname(__file__), "schema.json")) as fh: with open(path.join(path.dirname(__file__), "schema.json")) as fh:
schema = json.load(fh) schema = json.load(fh)
print(schema)
print(self.data.schema)
self.assertEqual(self.data.schema, schema) self.assertEqual(self.data.schema, schema)
def test_schema_produces_error(self): def test_schema_produces_error(self):