Viewport fills entire screen (#430)

* full pane webgl and svg

* fixes for full pane selection and centering

* force graph remount, clear brush state

client/src/actions/index.js

@@ -297,6 +297,9 @@ const resetInterface = () => (dispatch, getState) => {
     type: "reset World to eq Universe",
     universe
   });
+  dispatch({
+    type: "increment graph render counter"
+  });
 };
 
 export default {

client/src/components/app.js

@@ -11,7 +11,8 @@ import actions from "../actions";
 
 @connect(state => ({
   loading: state.controls.loading,
-  error: state.controls.error
+  error: state.controls.error,
+  graphRenderCounter: state.controls.graphRenderCounter
 }))
 class App extends React.Component {
   constructor(props) {
@@ -54,7 +55,7 @@ class App extends React.Component {
   }
 
   render() {
-    const { loading } = this.props;
+    const { loading, error, graphRenderCounter } = this.props;
     return (
       <Container>
         <Helmet title="cellxgene" />
@@ -79,10 +80,8 @@ class App extends React.Component {
               marginLeft: 350 /* but responsive */
             }}
           >
-            {loading ? null : <Graph />}
+            {loading ? null : <Graph key={graphRenderCounter} />}
-
             <Legend />
-            {}
           </div>
         </div>
       </Container>

client/src/components/graph/drawPointsRegl.js

@@ -38,7 +38,7 @@ export default function(regl) {
     uniforms: {
       distance: regl.prop("distance"),
       view: regl.prop("view"),
-      projection: () => mat4.perspective([], Math.PI / 2, 1, 0.01, 1000)
+      projection: ({viewportWidth, viewportHeight}) => mat4.perspective([], Math.PI / 2, viewportWidth / viewportHeight, 0.01, 1000)
     },
 
     count: regl.prop("count"),

client/src/components/graph/graph.js

@@ -6,8 +6,7 @@ import { connect } from "react-redux";
 import mat4 from "gl-mat4";
 import _regl from "regl";
 import { Button, AnchorButton, Tooltip } from "@blueprintjs/core";
-import { worldEqUniverse } from "../../util/stateManager/world";
+import * as globals from "../../globals";
-
 import setupSVGandBrushElements from "./setupSVGandBrush";
 import actions from "../../actions";
 import _camera from "../../util/camera";
@@ -30,9 +29,9 @@ class Graph extends React.Component {
     super(props);
     this.count = 0;
     this.inverse = mat4.identity([]);
-    this.graphPaddingTop = 100;
+    this.graphPaddingTop = 0;
     this.graphPaddingBottom = 45;
-    this.graphPaddingRight = 10;
+    this.graphPaddingRight = globals.leftSidebarWidth;
     this.renderCache = {
       positions: null,
       colors: null
@@ -126,18 +125,24 @@ class Graph extends React.Component {
         const glScaleX = scaleLinear([0, 1], [-1, 1]);
         const glScaleY = scaleLinear([0, 1], [1, -1]);
 
+        const offset = [d3.mean(obsLayout.X) - 0.5, d3.mean(obsLayout.Y) - 0.5];
+
         for (
           let i = 0, { positions } = this.renderCache;
           i < cellCount;
           i += 1
         ) {
-          positions[2 * i] = glScaleX(obsLayout.X[i]);
+          positions[2 * i] = glScaleX(obsLayout.X[i] - offset[0]);
-          positions[2 * i + 1] = glScaleY(obsLayout.Y[i]);
+          positions[2 * i + 1] = glScaleY(obsLayout.Y[i] - offset[1]);
         }
         pointBuffer({
           data: this.renderCache.positions,
           dimension: 2
         });
+
+        this.setState({
+          offset
+        });
       }
 
       // Colors for each point - a cached value that only changes when
@@ -196,7 +201,7 @@ class Graph extends React.Component {
         this.handleBrushSelectAction.bind(this),
         this.handleBrushDeselectAction.bind(this),
         responsive,
-        this.graphPaddingTop
+        this.graphPaddingRight
       );
       this.setState({ svg: newSvg, brush });
     }
@@ -251,7 +256,7 @@ class Graph extends React.Component {
     an event on procedural deselect because it is move: null
     */
 
-    const { camera } = this.state;
+    const { camera, offset } = this.state;
     const { dispatch, responsive } = this.props;
 
     if (d3.event.sourceEvent !== null) {
@@ -262,6 +267,7 @@ class Graph extends React.Component {
       https://bl.ocks.org/EfratVil/0e542f5fc426065dd1d4b6daaa345a9f
     */
       const s = d3.event.selection;
+      const gl = this.state.regl._gl;
       /*
       event describing brush position:
       @-------|
@@ -270,19 +276,23 @@ class Graph extends React.Component {
       |-------@
     */
 
+      // get aspect ratio
+      const aspect = gl.drawingBufferWidth / gl.drawingBufferHeight;
+
       // compute inverse view matrix
       const inverse = mat4.invert([], camera.view());
 
       // transform screen coordinates -> cell coordinates
       const invert = pin => {
-        const x = (2 * pin[0]) / (responsive.height - this.graphPaddingTop) - 1;
+        const x =
+          (2 * pin[0]) / (responsive.width - this.graphPaddingRight) - 1;
         const y =
           2 * (1 - pin[1] / (responsive.height - this.graphPaddingTop)) - 1;
         const pout = [
-          x * inverse[14] + inverse[12],
+          x * inverse[14] * aspect + inverse[12],
           y * inverse[14] + inverse[13]
         ];
-        return [(pout[0] + 1) / 2, (pout[1] + 1) / 2];
+        return [(pout[0] + 1) / 2 + offset[0], (pout[1] + 1) / 2 + offset[1]];
       };
 
       const brushCoords = {
@@ -366,6 +376,7 @@ class Graph extends React.Component {
                 style={{ marginRight: 10 }}
                 onClick={() => {
                   dispatch(actions.regraph());
+                  dispatch({ type: "increment graph render counter" });
                 }}
               >
                 subset to current selection
@@ -421,12 +432,10 @@ class Graph extends React.Component {
         </div>
         <div
           style={{
-            marginRight: 50,
-            marginTop: 50,
             zIndex: -9999,
             position: "fixed",
-            right: this.graphPaddingRight,
+            top: 0,
-            bottom: this.graphPaddingBottom
+            right: 0
           }}
         >
           <div
@@ -437,7 +446,7 @@ class Graph extends React.Component {
           />
           <div style={{ padding: 0, margin: 0 }}>
             <canvas
-              width={responsive.height - this.graphPaddingTop}
+              width={responsive.width - this.graphPaddingRight}
               height={responsive.height - this.graphPaddingTop}
               ref={canvas => {
                 this.reglCanvas = canvas;

client/src/components/graph/setupSVGandBrush.js

@@ -12,22 +12,18 @@ export default (
   handleBrushSelectAction,
   handleBrushDeselectAction,
   responsive,
-  graphPaddingTop
+  graphPaddingRight
 ) => {
-  const side = responsive.height - graphPaddingTop;
   const svg = d3
     .select("#graphAttachPoint")
     .append("svg")
-    .attr("width", side)
+    .attr("width", responsive.width - graphPaddingRight)
-    .attr("height", side)
+    .attr("height", responsive.height)
     .attr("class", `${styles.graphSVG}`);
 
   const brush = d3
     .brush()
-    .extent([
+    .extent([[0, 0], [responsive.width - graphPaddingRight, responsive.height]])
-      [0, 0],
-      [responsive.height - graphPaddingTop, responsive.height - graphPaddingTop]
-    ])
     .on("brush", handleBrushSelectAction)
     .on("end", handleBrushDeselectAction);
 

client/src/reducers/controls.js

@@ -54,6 +54,7 @@ const Controls = (
     scatterplotXXaccessor: null, // just easier to read
     scatterplotYYaccessor: null,
     axesHaveBeenDrawn: false,
+    graphRenderCounter: 0 /* integer as <Component key={graphRenderCounter} - a change in key forces a remount */,
     __storedStateForCelllist1__: null /* will need procedural control of brush ie., brush.extent https://bl.ocks.org/micahstubbs/3cda05ca68cba260cb81 */,
     __storedStateForCelllist2__: null
   },
@@ -410,7 +411,13 @@ const Controls = (
         ...state,
         opacityForDeselectedCells: action.data
       };
-
+    case "increment graph render counter": {
+      const c = state.graphRenderCounter + 1;
+      return {
+        ...state,
+        graphRenderCounter: c
+      };
+    }
     /*******************************
           Categorical metadata
     *******************************/