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More informative out-of-memory error (#644)

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* more informative error message: memory error

* flake fix
This commit is contained in:
Charlotte Weaver
2019-03-12 14:19:00 -07:00
committed by GitHub
parent aa5ce4a2f1
commit e875ed739b
1 changed files with 3 additions and 0 deletions
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server/app/scanpy_engine/scanpy_engine.py
+3
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@@ -143,6 +143,9 @@ class ScanpyEngine(CXGDriver):
"using `cellxgene prepare`, please run `cellxgene prepare --help` for more " "using `cellxgene prepare`, please run `cellxgene prepare --help` for more "
"information." "information."
) )
except MemoryError:
raise ScanpyFileError("Error while loading file: out of memory, file is too large"
" for memory available")
except Exception as e: except Exception as e:
raise ScanpyFileError( raise ScanpyFileError(
f"Error while loading file: {e}, File must be in the .h5ad format, please check " f"Error while loading file: {e}, File must be in the .h5ad format, please check "