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TS Revert (1) (#2402)

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* revert all commits to before Typescript migration

* update compat workflow to match latest deps (#2335)

* update compat workflow to match latest deps

* attempt to debug

* attempt to debug

* remove debugging code

* typo

* update deps to match desktop (#2340)

* fix: don't run lint with `--fix` on push tests (#2273)

* fix: don't run lint with `--fix` on push tests

* npx

Co-authored-by: maniarathi <mani.arathi@gmail.com>
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>

* rename X_approx_distribution to X_approximate_distribution (#2337)

* Correctly handle non-finite numbers in heuristic determination of X distribution (#2342)

* handle non-finites explicitly

* improve and test edge case handling for distribution estimation

* revert debugging changes

* code readability

* clean up type inferencing (#2332)

* unit tests for 64 bit conversion

* clean up type handling

* type inference tests

* more type inference fixes

* use schema to determine user intent for data typing

* stop using deprecated API

* fbs type encoding test

* add missing test

* add more tests

* correctly infer X type for CXG adaptor

* lint

* fix typo

* ts migration

* cleanup from PR review

* lint

* PR review changes

* remove unused packages from client (#2359)

* remove unused packages from client

* add missing peer dep

* fix: disable FE auth testing on compatibility tests (#2377)

* update: release process (#2277)

Co-authored-by: maniarathi <mani.arathi@gmail.com>

* fix: remove spaces in param setup (#2380)

* delete deploy workflow (#2396)

* undo reformatting which now does not pass lint

* fix snapshots which changed due to npm dep changes

* add missing quoting to snapshot

* another snapshot typo fix

* TS Revert (2) - replay PR #2347 and #2354 (#2403)

* replay edits from PR 2347

* TS Revert (3) - replay edits in PR #2327 (#2404)

* replay edits in PR 2327

* TS Revert (4) - replay PR #2355 (#2405)

* replay edits in PR 2355

* add additional babel config

* reformat with new prettier config

Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
Co-authored-by: maniarathi <mani.arathi@gmail.com>
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
This commit is contained in:
Bruce Martin
2021-08-23 15:01:36 -07:00
committed by GitHub
co-authored by maniarathi Madison Dunitz Severiano Badajoz
parent 295590a7c6
commit eaae6df5e3
253 changed files with 11175 additions and 22271 deletions
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client/__tests__/e2e/diffexpGeneSets.js
+105
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export const diffexpPop1Genes = [
"CD79A",
"HLA-DRB1",
"HLA-DQA1",
"HLA-DPB1",
"HLA-DQB1",
"HLA-DPA1",
"MS4A1",
"LTB",
"CD79B",
"CD37",
"HLA-DMA",
"TCL1A",
"LINC00926",
"HLA-DMB",
"HVCN1",
"EAF2",
"FCRLA",
"IRF8",
"PKIG",
"P2RX5",
"HLA-DOB",
"SPIB",
"BLNK",
"SWAP70",
"PNOC",
"CD19",
"SMIM14",
"CD72",
"KIAA0125",
"IGLL5",
"ARHGAP24",
"COTL1",
"C16orf74",
"BTK",
"SNX29P2",
"ADAM28",
"FCGR2B",
"PLD4",
"PPP1R14A",
"MZB1",
"KIAA0040",
"PHACTR1",
"FCRL2",
"RIC3",
"P2RY10",
"SCPEP1",
"DRAM2",
"RP5-887A10.1",
"CD82",
"GPX1",
];
export const diffexpPop2Genes = [
"NKG7",
"GZMB",
"CTSW",
"PRF1",
"GNLY",
"GZMA",
"CST7",
"FGFBP2",
"SRGN",
"CD247",
"FCGR3A",
"TYROBP",
"FCER1G",
"ID2",
"SPON2",
"CCL4",
"CCL5",
"GZMH",
"GIMAP7",
"CLIC3",
"HOPX",
"XCL2",
"LGALS1",
"IGFBP7",
"AKR1C3",
"IL32",
"EFHD2",
"PRSS23",
"TTC38",
"ZAP70",
"S1PR5",
"SAMD3",
"GIMAP4",
"CCL3",
"ABI3",
"XCL1",
"S100A6",
"UBB",
"GPR56",
"PDIA3",
"S100A11",
"APOBEC3G",
"HAVCR2",
"PLEKHF1",
"LITAF",
"ARPC5L",
"PTGDR",
"PRMT2",
"GSTP1",
"FCRL6",
];