TS Revert (1) (#2402)

* revert all commits to before Typescript migration * update compat workflow to match latest deps (#2335) * update compat workflow to match latest deps * attempt to debug * attempt to debug * remove debugging code * typo * update deps to match desktop (#2340) * fix: don't run lint with `--fix` on push tests (#2273) * fix: don't run lint with `--fix` on push tests * npx Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com> * rename X_approx_distribution to X_approximate_distribution (#2337) * Correctly handle non-finite numbers in heuristic determination of X distribution (#2342) * handle non-finites explicitly * improve and test edge case handling for distribution estimation * revert debugging changes * code readability * clean up type inferencing (#2332) * unit tests for 64 bit conversion * clean up type handling * type inference tests * more type inference fixes * use schema to determine user intent for data typing * stop using deprecated API * fbs type encoding test * add missing test * add more tests * correctly infer X type for CXG adaptor * lint * fix typo * ts migration * cleanup from PR review * lint * PR review changes * remove unused packages from client (#2359) * remove unused packages from client * add missing peer dep * fix: disable FE auth testing on compatibility tests (#2377) * update: release process (#2277) Co-authored-by: maniarathi <mani.arathi@gmail.com> * fix: remove spaces in param setup (#2380) * delete deploy workflow (#2396) * undo reformatting which now does not pass lint * fix snapshots which changed due to npm dep changes * add missing quoting to snapshot * another snapshot typo fix * TS Revert (2) - replay PR #2347 and #2354 (#2403) * replay edits from PR 2347 * TS Revert (3) - replay edits in PR #2327 (#2404) * replay edits in PR 2327 * TS Revert (4) - replay PR #2355 (#2405) * replay edits in PR 2355 * add additional babel config * reformat with new prettier config Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com> Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
2026-09-28 10:38:12 +08:00 · 2021-08-23 15:01:36 -07:00
parent 295590a7c6
commit eaae6df5e3
253 changed files with 11175 additions and 22271 deletions
@@ -0,0 +1,192 @@
+/*
+Action creators for selection 
+*/
+export const selectContinuousMetadataAction =
+  (type, query, range, oldProps = {}) =>
+  async (dispatch, getState) => {
+    const { obsCrossfilter: prevObsCrossfilter } = getState();
+
+    const selection = range
+      ? {
+          mode: "range",
+          lo: range[0],
+          hi: range[1],
+          inclusive: true, // [lo, hi] incluisve selection
+        }
+      : { mode: "all" };
+
+    const obsCrossfilter = await prevObsCrossfilter.select(...query, selection);
+
+    dispatch({
+      type,
+      obsCrossfilter,
+      range,
+      ...oldProps,
+    });
+  };
+
+export const selectCategoricalMetadataAction =
+  (
+    type, // action type
+    metadataField, // annotation category name
+    labels,
+    label, // the label being selected/deselected
+    isSelected, // bool
+    oldProps = {}
+  ) =>
+  async (dispatch, getState) => {
+    const { obsCrossfilter: prevObsCrossfilter, categoricalSelection } =
+      getState();
+
+    const labelSelectionState = new Map(categoricalSelection[metadataField]);
+    labels.forEach(
+      (l) => labelSelectionState.has(l) || labelSelectionState.set(l, true)
+    );
+    labelSelectionState.set(label, isSelected);
+
+    const values = Array.from(labelSelectionState.keys()).filter((k) =>
+      labelSelectionState.get(k)
+    );
+    const selection = {
+      mode: "exact",
+      values,
+    };
+    const obsCrossfilter = await prevObsCrossfilter.select(
+      "obs",
+      metadataField,
+      selection
+    );
+
+    dispatch({
+      type,
+      obsCrossfilter,
+      metadataField,
+      labelSelectionState,
+      ...oldProps,
+    });
+  };
+
+export const selectCategoricalAllMetadataAction =
+  (
+    type, // action type
+    metadataField, // annotation category name
+    labels,
+    isSelected, // bool, select all or none
+    oldProps = {}
+  ) =>
+  async (dispatch, getState) => {
+    const { obsCrossfilter: prevObsCrossfilter, categoricalSelection } =
+      getState();
+
+    const labelSelectionState = new Map(categoricalSelection[metadataField]);
+    labels.forEach((label) => labelSelectionState.set(label, isSelected));
+
+    const selection = { mode: isSelected ? "all" : "none" };
+    const obsCrossfilter = await prevObsCrossfilter.select(
+      "obs",
+      metadataField,
+      selection
+    );
+
+    dispatch({
+      type,
+      obsCrossfilter,
+      metadataField,
+      labelSelectionState,
+      ...oldProps,
+    });
+  };
+
+/**
+ ** Graph selection-related actions
+ **/
+
+export const graphBrushStartAction = () =>
+  /* no change to crossfilter until a change fires */
+  ({ type: "graph brush start" });
+
+const _graphBrushWithinRectAction =
+  (type, embName, brushCoords) => async (dispatch, getState) => {
+    const { obsCrossfilter: prevObsCrossfilter } = getState();
+
+    const selection = { mode: "within-rect", ...brushCoords };
+    const obsCrossfilter = await prevObsCrossfilter.select(
+      "emb",
+      embName,
+      selection
+    );
+
+    dispatch({
+      type,
+      obsCrossfilter,
+      brushCoords,
+    });
+  };
+
+const _graphAllAction = (type, embName) => async (dispatch, getState) => {
+  const { obsCrossfilter: prevObsCrossfilter } = getState();
+
+  const obsCrossfilter = await prevObsCrossfilter.select("emb", embName, {
+    mode: "all",
+  });
+
+  dispatch({
+    type,
+    obsCrossfilter,
+  });
+};
+
+export const graphBrushChangeAction = (embName, brushCoords) =>
+  _graphBrushWithinRectAction("graph brush change", embName, brushCoords);
+
+export const graphBrushEndAction = (embName, brushCoords) =>
+  _graphBrushWithinRectAction("graph brush end", embName, brushCoords);
+
+export const graphBrushCancelAction = (embName) =>
+  _graphAllAction("graph brush cancel", embName);
+export const graphBrushDeselectAction = (embName) =>
+  _graphAllAction("graph brush deselect", embName);
+
+export const graphLassoStartAction = () =>
+  /* no change to crossfilter until a change fires */
+  ({ type: "graph lasso start" });
+
+export const graphLassoCancelAction = (embName) =>
+  _graphAllAction("graph lasso cancel", embName);
+
+export const graphLassoDeselectAction = (embName) =>
+  _graphAllAction("graph lasso cancel", embName);
+
+export const graphLassoEndAction =
+  (embName, polygon) => async (dispatch, getState) => {
+    const { obsCrossfilter: prevObsCrossfilter } = getState();
+
+    const selection = {
+      mode: "within-polygon",
+      polygon,
+    };
+    const obsCrossfilter = await prevObsCrossfilter.select(
+      "emb",
+      embName,
+      selection
+    );
+
+    dispatch({
+      type: "graph lasso end",
+      obsCrossfilter,
+      polygon,
+    });
+  };
+
+/*
+Differential expression set selection
+*/
+export const setCellSetFromSelection = (cellSetId) => (dispatch, getState) => {
+  const { obsCrossfilter } = getState();
+  const selected = obsCrossfilter.allSelectedLabels();
+
+  dispatch({
+    type: `store current cell selection as differential set ${cellSetId}`,
+    data: selected.length > 0 ? selected : null,
+  });
+};