TS Revert (1) (#2402)

* revert all commits to before Typescript migration

* update compat workflow to match latest deps (#2335)

* update compat workflow to match latest deps

* attempt to debug

* attempt to debug

* remove debugging code

* typo

* update deps to match desktop (#2340)

* fix: don't run lint with `--fix` on push tests (#2273)

* fix: don't run lint with `--fix` on push tests

* npx

Co-authored-by: maniarathi <mani.arathi@gmail.com>
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>

* rename X_approx_distribution to X_approximate_distribution (#2337)

* Correctly handle non-finite numbers in heuristic determination of X distribution (#2342)

* handle non-finites explicitly

* improve and test edge case handling for distribution estimation

* revert debugging changes

* code readability

* clean up type inferencing (#2332)

* unit tests for 64 bit conversion

* clean up type handling

* type inference tests

* more type inference fixes

* use schema to determine user intent for data typing

* stop using deprecated API

* fbs type encoding test

* add missing test

* add more tests

* correctly infer X type for CXG adaptor

* lint

* fix typo

* ts migration

* cleanup from PR review

* lint

* PR review changes

* remove unused packages from client (#2359)

* remove unused packages from client

* add missing peer dep

* fix: disable FE auth testing on compatibility tests (#2377)

* update: release process (#2277)

Co-authored-by: maniarathi <mani.arathi@gmail.com>

* fix: remove spaces in param setup (#2380)

* delete deploy workflow (#2396)

* undo reformatting which now does not pass lint

* fix snapshots which changed due to npm dep changes

* add missing quoting to snapshot

* another snapshot typo fix

* TS Revert (2) - replay PR #2347 and #2354 (#2403)

* replay edits from PR 2347

* TS Revert (3) - replay edits in PR #2327 (#2404)

* replay edits in PR 2327

* TS Revert (4) - replay PR #2355 (#2405)

* replay edits in PR 2355

* add additional babel config

* reformat with new prettier config

Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
Co-authored-by: maniarathi <mani.arathi@gmail.com>
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
This commit is contained in:
Bruce Martin
2021-08-23 15:01:36 -07:00
committed by GitHub
co-authored by maniarathi Madison Dunitz Severiano Badajoz
parent 295590a7c6
commit eaae6df5e3
253 changed files with 11175 additions and 22271 deletions
@@ -0,0 +1,76 @@
import React from "react";
import { connect } from "react-redux";
import { ButtonGroup, AnchorButton, Tooltip } from "@blueprintjs/core";
import * as globals from "../../globals";
import styles from "./menubar.css";
import actions from "../../actions";
import CellSetButton from "./cellSetButtons";
@connect((state) => ({
differential: state.differential,
diffexpMayBeSlow: state.config?.parameters?.["diffexp-may-be-slow"] ?? false,
diffexpCellcountMax: state.config?.limits?.diffexp_cellcount_max,
}))
class DiffexpButtons extends React.PureComponent {
computeDiffExp = () => {
const { dispatch, differential } = this.props;
if (differential.celllist1 && differential.celllist2) {
dispatch(
actions.requestDifferentialExpression(
differential.celllist1,
differential.celllist2
)
);
}
};
render() {
/* diffexp-related buttons may be disabled */
const { differential, diffexpMayBeSlow, diffexpCellcountMax } = this.props;
const haveBothCellSets =
!!differential.celllist1 && !!differential.celllist2;
const haveEitherCellSet =
!!differential.celllist1 || !!differential.celllist2;
const slowMsg = diffexpMayBeSlow
? " (CAUTION: large dataset - may take longer or fail)"
: "";
const tipMessage = `See top 10 differentially expressed genes${slowMsg}`;
const tipMessageWarn = `The total number of cells for differential expression computation
may not exceed ${diffexpCellcountMax}. Try reselecting new cell sets.`;
const warnMaxSizeExceeded =
haveEitherCellSet &&
!!diffexpCellcountMax &&
(differential.celllist1?.length ?? 0) +
(differential.celllist2?.length ?? 0) >
diffexpCellcountMax;
return (
<ButtonGroup className={styles.menubarButton}>
<CellSetButton eitherCellSetOneOrTwo={1} />
<CellSetButton eitherCellSetOneOrTwo={2} />
<Tooltip
content={warnMaxSizeExceeded ? tipMessageWarn : tipMessage}
position="bottom"
hoverOpenDelay={globals.tooltipHoverOpenDelayQuick}
intent={warnMaxSizeExceeded ? "danger" : "none"}
>
<AnchorButton
disabled={!haveBothCellSets || warnMaxSizeExceeded}
intent={warnMaxSizeExceeded ? "danger" : "primary"}
data-testid="diffexp-button"
loading={differential.loading}
icon="left-join"
fill
onClick={this.computeDiffExp}
/>
</Tooltip>
</ButtonGroup>
);
}
}
export default DiffexpButtons;