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TS Revert (1) (#2402)
* revert all commits to before Typescript migration * update compat workflow to match latest deps (#2335) * update compat workflow to match latest deps * attempt to debug * attempt to debug * remove debugging code * typo * update deps to match desktop (#2340) * fix: don't run lint with `--fix` on push tests (#2273) * fix: don't run lint with `--fix` on push tests * npx Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com> * rename X_approx_distribution to X_approximate_distribution (#2337) * Correctly handle non-finite numbers in heuristic determination of X distribution (#2342) * handle non-finites explicitly * improve and test edge case handling for distribution estimation * revert debugging changes * code readability * clean up type inferencing (#2332) * unit tests for 64 bit conversion * clean up type handling * type inference tests * more type inference fixes * use schema to determine user intent for data typing * stop using deprecated API * fbs type encoding test * add missing test * add more tests * correctly infer X type for CXG adaptor * lint * fix typo * ts migration * cleanup from PR review * lint * PR review changes * remove unused packages from client (#2359) * remove unused packages from client * add missing peer dep * fix: disable FE auth testing on compatibility tests (#2377) * update: release process (#2277) Co-authored-by: maniarathi <mani.arathi@gmail.com> * fix: remove spaces in param setup (#2380) * delete deploy workflow (#2396) * undo reformatting which now does not pass lint * fix snapshots which changed due to npm dep changes * add missing quoting to snapshot * another snapshot typo fix * TS Revert (2) - replay PR #2347 and #2354 (#2403) * replay edits from PR 2347 * TS Revert (3) - replay edits in PR #2327 (#2404) * replay edits in PR 2327 * TS Revert (4) - replay PR #2355 (#2405) * replay edits in PR 2355 * add additional babel config * reformat with new prettier config Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com> Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
This commit is contained in:
Bruce Martin
co-authored by
maniarathi
Madison Dunitz
Severiano Badajoz
maniarathi
Madison Dunitz
Severiano Badajoz
parent
295590a7c6
commit
eaae6df5e3
@@ -0,0 +1,123 @@
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import { Colors } from "@blueprintjs/core";
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import { dispatchNetworkErrorMessageToUser } from "./util/actionHelpers";
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import ENV_DEFAULT from "../../environment.default.json";
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/* overflow category values are created using this string */
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export const overflowCategoryLabel = ": all other labels";
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/* default "unassigned" value for user-created categorical metadata */
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export const unassignedCategoryLabel = "unassigned";
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/*
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these are default values for configuration the CLI may supply.
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See the REST API and CLI specs for more info.
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*/
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export const configDefaults = {
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features: {},
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displayNames: {},
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parameters: {
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"disable-diffexp": false,
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"diffexp-may-be-slow": false,
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},
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links: {},
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};
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/*
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Most configuration is stored in the reducer. A handful of values
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are global and stored here. They are typically set by the config
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action handler, which pull the information from the backend/CLI.
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All should be set here to their default value.
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*/
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export const globalConfig = {
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/* if a categorical metadata field has more options than this, truncate */
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maxCategoricalOptionsToDisplay: 200,
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};
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/* colors */
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export const blue = Colors.BLUE3;
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export const linkBlue = Colors.BLUE5;
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export const lightestGrey = "rgb(249,249,249)";
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export const lighterGrey = "rgb(245,245,245)";
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export const lightGrey = Colors.LIGHT_GRAY1;
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export const mediumGrey = "rgb(153,153,153)";
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export const darkGrey = "rgb(102,102,102)";
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export const darkerGrey = "rgb(51,51,51)";
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export const brightBlue = "#4a90e2";
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export const brightGreen = "#A2D729";
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export const darkGreen = "#448C4D";
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export const nonFiniteCellColor = lightGrey;
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export const defaultCellColor = "rgb(0,0,0,1)";
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export const logoColor = "black"; /* logo pink: "#E9429A" */
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/* typography constants */
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export const tiniestFontSize = 12;
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export const largestFontSize = 24;
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export const uppercaseLetterSpacing = "0.04em";
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export const bolder = 700;
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export const accentFont = "Georgia,Times,Times New Roman,serif";
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export const maxParagraphWidth = 600;
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/* layout styles constants */
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export const cellxgeneTitleLeftPadding = 14;
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export const cellxgeneTitleTopPadding = 7;
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export const datasetTitleMaxCharacterCount = 25;
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export const maxControlsWidth = 800;
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export const graphMargin = { top: 20, right: 10, bottom: 30, left: 40 };
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export const graphWidth = 700;
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export const graphHeight = 700;
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export const scatterplotMarginLeft = 11;
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export const rightSidebarWidth = 365;
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export const leftSidebarWidth = 365;
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export const leftSidebarSectionHeading = {
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fontSize: 18,
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textTransform: "uppercase",
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fontWeight: 500,
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letterSpacing: ".05em",
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};
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export const leftSidebarSectionPadding = 10;
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export const categoryLabelDisplayStringLongLength = 27;
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export const categoryLabelDisplayStringShortLength = 11;
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export const categoryDisplayStringMaxLength = 33;
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export const maxUserDefinedGenes = 25;
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export const maxGenes = 100;
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export const diffexpPopNamePrefix1 = "Pop1 high";
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export const diffexpPopNamePrefix2 = "Pop2 high";
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/* various timing-related behaviors */
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export const tooltipHoverOpenDelay = 1000; /* ms delay before a tooltip displays */
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export const tooltipHoverOpenDelayQuick = 500;
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const CXG_SERVER_PORT =
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process.env.CXG_SERVER_PORT || ENV_DEFAULT.CXG_SERVER_PORT;
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let _API;
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if (window.CELLXGENE && window.CELLXGENE.API) {
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_API = window.CELLXGENE.API;
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} else {
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if (CXG_SERVER_PORT === undefined) {
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const errorMessage = "Please set the CXG_SERVER_PORT environment variable.";
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dispatchNetworkErrorMessageToUser(errorMessage);
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throw new Error(errorMessage);
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}
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_API = {
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// prefix: "http://api.clustering.czi.technology/api/",
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// prefix: "http://tabulamuris.cxg.czi.technology/api/",
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// prefix: "http://api-staging.clustering.czi.technology/api/",
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prefix: `http://localhost:${CXG_SERVER_PORT}/api/`,
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version: "v0.2/",
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};
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}
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export const API = _API;
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