fork/cellxgene
1
0
Fork 0
mirror of https://github.com/chanzuckerberg/cellxgene.git synced 2026-10-04 23:48:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

genesets route for local server (#2079)

Browse Source 
* first cut at GET /genesets route

* update existing tests to match code changes

* more GET /genesets and initial tests

* add missing test fixture

* geneset validation accepts OTA format

* genesets route: better error handling, more tests

* lint
This commit is contained in:
Bruce Martin
2021-02-26 17:53:07 -08:00
committed by GitHub
parent 09466a5c32
commit f3a3820ffa
18 changed files with 813 additions and 82 deletions
Download Patch File Download Diff File Expand all files Collapse all files
local_server/common/config/client_config.py
+3
View File
@@ -44,6 +44,9 @@ def get_client_config(app_config, data_adaptor):
"annotations": False,
"annotations_file": None,
"annotations_dir": None,
"annotations_genesets": True, # feature flag
"annotations_genesets_readonly": dataset_config.user_annotations__genesets__readonly,
"annotations_genesets_summary_methods": ["mean"],
"annotations_cell_ontology_enabled": False,
"annotations_cell_ontology_obopath": None,
"annotations_cell_ontology_terms": None,