genesets route for local server (#2079)

* first cut at GET /genesets route

* update existing tests to match code changes

* more GET /genesets and initial tests

* add missing test fixture

* geneset validation accepts OTA format

* genesets route: better error handling, more tests

* lint
This commit is contained in:
Bruce Martin
2021-02-26 17:53:07 -08:00
committed by GitHub
parent 09466a5c32
commit f3a3820ffa
18 changed files with 813 additions and 82 deletions
+4 -1
View File
@@ -63,10 +63,13 @@ dataset:
type: local_file_csv
local_file_csv:
directory: null
file: null
file: null # annotations file name
genesets_file: null # gene sets file name
ontology:
enable: false
obo_location: null
genesets:
readonly: false # genesets CRUD enabled/disabled
embeddings:
names : []