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genesets e2e tests (#2241)
* __test: create geneset
* example dataset test geneset
* delete geneset test
* edit __test
* gene crud
* Update client/Makefile
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
* copy gene sets separately
* make fix
* ignore test files locally
* csv update
* updated csvs
* fix unit tests for gene set load routes
* add missing fix to czi_hosted unit test
* pin tiledb version, for czi_hosted backend, to <0.9
* Revert tiledb pin to be less than 0.9. Broken tests have been updated in main branch.
* newline, gitignore
* color by and subset
* diffexp sets equal
* add diff exp test class
* fix data class
* diffexp snapshot
* snapshot
* snap3
* snapshot parentInnerhtml
* remove snap
* updated anno snaps
* add test class to gene list div
* new snapshots
* kick off
* Revert "kick off"
This reverts commit 743f551d55.
* remove import
* eol
* revert changes to csv re: gene tests
* global name
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
Co-authored-by: bkmartinjr <bruce@chanzuckerberg.com>
Co-authored-by: Arathi Mani <arathi.mani@chanzuckerberg.com>
Co-authored-by: maniarathi <mani.arathi@gmail.com>
This commit is contained in:
co-authored by
Severiano Badajoz
bkmartinjr
Arathi Mani
maniarathi
parent
b714c18e75
commit
face1b3033
@@ -176,6 +176,137 @@ export async function createCategory(categoryName) {
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await clickOn("submit-category");
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}
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/*
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GENESET
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*/
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export async function colorByGeneset(genesetName) {
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await clickOn(`${genesetName}:colorby-entire-geneset`);
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}
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export async function colorByGene(gene) {
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await clickOn(`colorby-${gene}`);
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}
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export async function assertColorLegendLabel(label) {
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const handle = await waitByID("continuous_legend_color_by_label");
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const result = await handle.evaluate((node) => {
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return node.getAttribute("aria-label");
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});
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return expect(result).toBe(label);
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}
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export async function expandGeneset(genesetName) {
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const expand = await waitByID(`${genesetName}:geneset-expand`);
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const notExpanded = await expand.$(
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"[data-testclass='geneset-expand-is-not-expanded']"
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);
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if (notExpanded) await clickOn(`${genesetName}:geneset-expand`);
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}
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export async function createGeneset(genesetName) {
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await clickOnUntil("open-create-geneset-dialog", async () => {
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await expect(page).toMatchElement(getTestId("create-geneset-input"));
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});
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await typeInto("create-geneset-input", genesetName);
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await clickOn("submit-geneset");
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await waitByClass("autosave-complete");
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}
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export async function editGenesetName(genesetName, editText) {
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const editButton = `${genesetName}:edit-genesetName-mode`;
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const submitButton = `${genesetName}:submit-geneset`;
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await clickOnUntil(`${genesetName}:see-actions`, async () => {
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await expect(page).toMatchElement(getTestId(editButton));
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});
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await clickOn(editButton);
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await typeInto("rename-geneset-modal", editText);
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await clickOn(submitButton);
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}
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export async function deleteGeneset(genesetName) {
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const targetId = `${genesetName}:delete-geneset`;
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await clickOnUntil(`${genesetName}:see-actions`, async () => {
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await expect(page).toMatchElement(getTestId(targetId));
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});
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await clickOn(targetId);
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await assertGenesetDoesNotExist(genesetName);
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await waitByClass("autosave-complete");
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}
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export async function assertGenesetDoesNotExist(genesetName) {
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const result = await isElementPresent(
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getTestId(`${genesetName}:geneset-name`)
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);
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await expect(result).toBe(false);
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}
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export async function assertGenesetExists(genesetName) {
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const handle = await waitByID(`${genesetName}:geneset-name`);
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const result = await handle.evaluate((node) => {
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return node.getAttribute("aria-label");
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});
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return expect(result).toBe(genesetName);
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}
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/*
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GENE
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*/
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export async function addGeneToSet(genesetName, geneToAddToSet) {
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const submitButton = `${genesetName}:submit-gene`;
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await clickOn(`${genesetName}:add-new-gene-to-geneset`);
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await typeInto("add-genes", geneToAddToSet);
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await clickOn(submitButton);
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}
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export async function removeGene(geneSymbol) {
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const targetId = `delete-from-geneset:${geneSymbol}`;
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await clickOn(targetId);
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await waitByClass("autosave-complete");
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}
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export async function assertGeneExistsInGeneset(geneSymbol) {
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const handle = await waitByID(`${geneSymbol}:gene-label`);
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const result = await handle.evaluate((node) => {
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return node.getAttribute("aria-label");
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});
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return expect(result).toBe(geneSymbol);
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}
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export async function assertGeneDoesNotExist(geneSymbol) {
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const result = await isElementPresent(getTestId(`${geneSymbol}:gene-label`));
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await expect(result).toBe(false);
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}
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export async function expandGene(geneSymbol) {
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await clickOn(`maximize-${geneSymbol}`);
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}
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/*
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CATEGORY
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*/
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export async function duplicateCategory(categoryName) {
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await clickOn("open-annotation-dialog");
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