mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-10-03 09:48:11 +08:00
Dataframe, part deux - add varData and summarize() (#608)
* initial dataframe commit * initial dataframe port of core app * rename variables for clarity * remove unused import * comment out unused code * fix array handling bug in crossfilter dimension creation * allow creation of empty dataframes * handle non-existent columns * handle non-existent columns * revise tests for new dataframe * comments for clarity * comments for clarity * generate bulk add placeholder with real gene names * fix bug in gene name adding * more dataframe unit tests * fix bug - subset from current world, not universe * put cut and pasted code into a single function * improve caching of crossfilter * remove cascading update bug from graph * more performance work * improve state handling for scatterplot * performance optimization of critical path * add column summarization * dataframe utils * add callOnceLazy * fix tests * minor updates found during review * fix misspelling * remove RESTv02 from function names * comment cleanup * cut/icut col parameter defaults to null * break up large test * improve tests and comments on dataframe at/has functions * add Dataframe withCol/dropCol * expression varData now stored in a dataframe * dead code cleanup * use dataframe.summarize() * test cases for Dataframe.col.summarize * update test cases for new dataframe summarize * improve naming * use new hasCol API * add comments * add more Dataframe.withCol tests * add ability to specify row index in cut operation * retire subsetVarData function * correctly handle expression subsetting * lint and improve comments * rename cut to subset * changes based on PR review
This commit is contained in:
@@ -41,15 +41,13 @@ describe("createUniverseFromResponse", () => {
|
||||
expect(universe).toBeDefined();
|
||||
expect(universe).toMatchObject(
|
||||
expect.objectContaining({
|
||||
api: "0.2",
|
||||
nObs,
|
||||
nVar,
|
||||
schema: REST.schema.schema,
|
||||
obsAnnotations: expect.any(Dataframe.Dataframe),
|
||||
varAnnotations: expect.any(Dataframe.Dataframe),
|
||||
obsLayout: expect.any(Dataframe.Dataframe),
|
||||
summary: expect.any(Object),
|
||||
varDataCache: expect.any(Object)
|
||||
varData: expect.any(Dataframe.Dataframe)
|
||||
})
|
||||
);
|
||||
|
||||
@@ -63,5 +61,6 @@ describe("createUniverseFromResponse", () => {
|
||||
nVar,
|
||||
REST.schema.schema.annotations.var.length
|
||||
]);
|
||||
expect(universe.varData.isEmpty()).toBeTruthy();
|
||||
});
|
||||
});
|
||||
|
||||
Reference in New Issue
Block a user