import React from "react";
import { connect } from "react-redux";
import { FaChevronRight, FaChevronDown } from "react-icons/fa";
import actions from "../../actions";
import Gene from "./gene";
import { memoize } from "../../util/dataframe/util";
import Truncate from "../util/truncate";
import * as globals from "../../globals";
import GenesetMenus from "./menus/genesetMenus";
import EditGenesetNameDialogue from "./menus/editGenesetNameDialogue";
import HistogramBrush from "../brushableHistogram";
@connect((state, ownProps) => {
return {
world: state.world,
userDefinedGenes: state.controls.userDefinedGenes,
userDefinedGenesLoading: state.controls.userDefinedGenesLoading,
isColorAccessor: state.colors.colorAccessor === ownProps.setName,
};
})
class GeneSet extends React.Component {
_memoGenesToUpper = memoize(this._genesToUpper, (arr) => arr);
constructor(props) {
super(props);
this.state = {
isOpen: false,
};
}
_genesToUpper = (listGenes) => {
// Has to be a Map to preserve index
const upperGenes = new Map();
for (let i = 0, { length } = listGenes; i < length; i += 1) {
upperGenes.set(listGenes[i].toUpperCase(), i);
}
return upperGenes;
};
fetchGenes = () => {
const { world, dispatch, setGenes } = this.props;
const varIndexName = world.schema.annotations.var.index;
const worldGenes = world.varAnnotations.col(varIndexName).asArray();
const upperGenes = this._genesToUpper(setGenes);
const upperWorldGenes = this._memoGenesToUpper(worldGenes);
dispatch({ type: "bulk user defined gene start" });
Promise.all(
[...upperGenes.keys()].map((upperGene) => {
const indexOfGene = upperWorldGenes.get(upperGene);
return dispatch(
actions.requestUserDefinedGene(worldGenes[indexOfGene])
);
})
).then(
() => dispatch({ type: "bulk user defined gene complete" }),
() => dispatch({ type: "bulk user defined gene error" })
);
return undefined;
};
onGenesetMenuClick = () => {
const { isOpen } = this.state;
this.setState({ isOpen: !isOpen });
};
onColorChangeClick = () => {
// const { dispatch, setName } = this.props;
// dispatch({
// type: "color by gene set",
// colorAccessor: setName,
// });
};
renderGenes() {
const { setName, setGenes, setGenesWithDescriptions } = this.props;
return setGenes.map((gene) => {
const { geneDescription } = setGenesWithDescriptions.get(gene);
return (
No genes to display
)}