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3ebbb0ccbf
* move common code into server, update tests and makefile remove backend directory, refactor update smoke tests
63 lines
2.4 KiB
Python
63 lines
2.4 KiB
Python
import unittest
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from server.common.config.app_config import AppConfig
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from test import H5AD_FIXTURE
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from server.common.errors import ConfigurationError
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from test.unit.common.config import ConfigTests
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class BaseConfigTest(ConfigTests):
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def setUp(self):
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self.config_file_name = f"{unittest.TestCase.id(self).split('.')[-1]}.yml"
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self.config = AppConfig()
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self.config.update_server_config(app__flask_secret_key="secret")
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self.config.update_server_config(single_dataset__datapath=H5AD_FIXTURE)
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self.server_config = self.config.server_config
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self.config.complete_config()
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message_list = []
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def noop(message):
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message_list.append(message)
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messagefn = noop
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self.context = dict(messagefn=messagefn, messages=message_list)
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def get_config(self, **kwargs):
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file_name = self.custom_app_config(
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dataset_datapath=f"{H5AD_FIXTURE}", config_file_name=self.config_file_name, **kwargs
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)
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config = AppConfig()
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config.update_from_config_file(file_name)
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return config
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def test_mapping_creation_returns_map_of_server_and_dataset_config(self):
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config = AppConfig()
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mapping = config.dataset_config.create_mapping(config.default_config)
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self.assertIsNotNone(mapping["server__app__verbose"])
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self.assertIsNotNone(mapping["dataset__presentation__max_categories"])
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def test_changes_from_default_returns_list_of_nondefault_config_values(self):
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config = self.get_config(verbose="true", lfc_cutoff=0.05)
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server_changes = config.server_config.changes_from_default()
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dataset_changes = config.dataset_config.changes_from_default()
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self.assertEqual(
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server_changes,
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[
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("app__verbose", True, False),
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("app__flask_secret_key", "secret", None),
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("single_dataset__datapath", H5AD_FIXTURE, None),
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("data_locator__s3__region_name", "us-east-1", True),
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],
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)
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self.assertEqual(dataset_changes, [("diffexp__lfc_cutoff", 0.05, 0.01)])
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def test_check_config_throws_error_if_attr_has_not_been_checked(self):
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config = self.get_config(verbose="true")
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config.complete_config()
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config.check_config()
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config.update_server_config(app__verbose=False)
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with self.assertRaises(ConfigurationError):
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config.check_config()
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