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* revert all commits to before Typescript migration * update compat workflow to match latest deps (#2335) * update compat workflow to match latest deps * attempt to debug * attempt to debug * remove debugging code * typo * update deps to match desktop (#2340) * fix: don't run lint with `--fix` on push tests (#2273) * fix: don't run lint with `--fix` on push tests * npx Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com> * rename X_approx_distribution to X_approximate_distribution (#2337) * Correctly handle non-finite numbers in heuristic determination of X distribution (#2342) * handle non-finites explicitly * improve and test edge case handling for distribution estimation * revert debugging changes * code readability * clean up type inferencing (#2332) * unit tests for 64 bit conversion * clean up type handling * type inference tests * more type inference fixes * use schema to determine user intent for data typing * stop using deprecated API * fbs type encoding test * add missing test * add more tests * correctly infer X type for CXG adaptor * lint * fix typo * ts migration * cleanup from PR review * lint * PR review changes * remove unused packages from client (#2359) * remove unused packages from client * add missing peer dep * fix: disable FE auth testing on compatibility tests (#2377) * update: release process (#2277) Co-authored-by: maniarathi <mani.arathi@gmail.com> * fix: remove spaces in param setup (#2380) * delete deploy workflow (#2396) * undo reformatting which now does not pass lint * fix snapshots which changed due to npm dep changes * add missing quoting to snapshot * another snapshot typo fix * TS Revert (2) - replay PR #2347 and #2354 (#2403) * replay edits from PR 2347 * TS Revert (3) - replay edits in PR #2327 (#2404) * replay edits in PR 2327 * TS Revert (4) - replay PR #2355 (#2405) * replay edits in PR 2355 * add additional babel config * reformat with new prettier config Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com> Co-authored-by: maniarathi <mani.arathi@gmail.com> Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
54 lines
1.9 KiB
JavaScript
54 lines
1.9 KiB
JavaScript
/*
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The original motivation for this file is name collision. It's possible
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to have two of the same gene, user defined and diffexpressed, on the client
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simultaneously, looking at the same data in the cache but with two
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dimensions and two crossfilters. It's also possible that someone could
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have a obsAnnotation named X, but we are using that for layout. So
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we namespace, and abstract to avoid proliferating strings throughout the
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codebase.
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It is _no longer_ used to remove collisions in the crossfilter or
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anno matrix namespaces. It is still used by the component tier.
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*/
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const makeDimensionName = (namespace, key) => `${namespace}_${key}`;
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export const layoutDimensionName = (key) => makeDimensionName("layout", key);
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export const obsAnnoDimensionName = (key) => makeDimensionName("obsAnno", key);
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export const diffexpDimensionName = (key) =>
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makeDimensionName("varData_diffexp", key);
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export const userDefinedDimensionName = (key) =>
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makeDimensionName("varData_userDefined", key);
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export const geneSetSummaryDimensionName = (key) =>
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makeDimensionName("geneSetSummary", key);
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/*
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continuousNamespace = {
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isObs: true,
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isDiffExp: false,
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isUserDefined: false,
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isGeneSet: false,
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}
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ie., makeContinuousDimensionName(continuousNamespace = {isObs: true}, "total_reads")
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see: histogram brush, as it doesn't know what type of continuous it was with only field
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*/
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export const makeContinuousDimensionName = (continuousNamespace, key) => {
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let name;
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if (continuousNamespace.isObs) {
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name = obsAnnoDimensionName(key);
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} else if (continuousNamespace.isDiffExp) {
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name = diffexpDimensionName(key);
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} else if (continuousNamespace.isUserDefined) {
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name = userDefinedDimensionName(key);
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} else if (continuousNamespace.isGeneSetSummary) {
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name = geneSetSummaryDimensionName(key);
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} else {
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throw new Error("unknown continuous dimension");
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}
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return name;
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};
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