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83376627e8
* 1510-smoke-test * config default * update tests * update test config * fix linter errors * more comments * address comments * use npm install in push_tests.yml * use environment.default.json * adding docs * Take care of @mweiden's nits * Save screenshots in the __tests__/screenshots/ directory * typo * docs * Add chart tests (#1580) * merge tests * check if bin creation returned null before rendering charts (#1576) * check if bin creation returned null before rendering charts * refactor chart rendering into functions (#1577) * little fixes from PR * reintroduce fix to check for null values * change getAllByClass to return element * slice instead * new stackedbar test * feedback-1573-test (#1579) * feedback-1573-test * enable whole test set * revert tests Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com> * tweak test to actually render chart * include snapshot * remove async * fix getAllHistograms * properly grab id Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com> Co-authored-by: Matt Weiden <538456+mweiden@users.noreply.github.com> Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
74 lines
2.5 KiB
JavaScript
74 lines
2.5 KiB
JavaScript
import _ from "lodash";
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import calcCentroid from "../../src/util/centroid";
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import quantile from "../../src/util/quantile";
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import * as Universe from "../../src/util/stateManager/universe";
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import { matrixFBSToDataframe } from "../../src/util/stateManager/matrix";
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import * as World from "../../src/util/stateManager/world";
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import * as REST from "./stateManager/sampleResponses";
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describe("centroid", () => {
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let world;
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beforeAll(() => {
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// Create world + universe
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let universe = Universe.createUniverseFromResponse(
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_.cloneDeep(REST.config),
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_.cloneDeep(REST.schema)
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);
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universe = {
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...universe,
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...Universe.addObsAnnotations(
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universe,
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matrixFBSToDataframe(REST.annotationsObs)
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),
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...Universe.addVarAnnotations(
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universe,
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matrixFBSToDataframe(REST.annotationsVar)
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),
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...Universe.addObsLayout(universe, matrixFBSToDataframe(REST.layoutObs)),
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};
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world = World.createWorldFromEntireUniverse(universe);
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});
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test("field4 (categorical obsAnnotation)", () => {
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const centroidResult = calcCentroid(world, "field4", ["umap_0", "umap_1"]);
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// Check to see that a centroid has been calculated for every categorical value
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const keysAsArray = Array.from(centroidResult.keys());
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expect(keysAsArray).toEqual(
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expect.arrayContaining([83, true, "foo", 2.222222])
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);
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// This expected result assumes that all cells belong in all categorical values inside of sample response
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const expectedResult = [
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quantile([0.5], world.obsLayout.col("umap_0").asArray())[0],
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quantile([0.5], world.obsLayout.col("umap_1").asArray())[0],
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];
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centroidResult.forEach((coordinate) => {
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expect(coordinate).toEqual(expectedResult);
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});
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});
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test("field3 (boolean obsAnnotation)", () => {
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const centroidResult = calcCentroid(world, "field3", ["umap_0", "umap_1"]);
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// Check to see that a centroid has been calculated for every categorical value
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const keysAsArray = Array.from(centroidResult.keys());
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expect(keysAsArray).toEqual(expect.arrayContaining([false, true]));
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// This expected result assumes that all cells belong in all categorical values inside of sample response
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const expectedResult = [
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quantile([0.5], world.obsLayout.col("umap_0").asArray())[0],
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quantile([0.5], world.obsLayout.col("umap_1").asArray())[0],
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];
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centroidResult.forEach((coordinate) => {
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expect(coordinate).toEqual(expectedResult);
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});
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});
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});
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