Bruce Martin 349c413d8b anndata X indexing & version compatibility improvements (#1157) ...

* revert MatrixProxy; replace with correct use of adata slicing

* work around 0.6 adata slicing bug

* fix incorrect var slice

* simplify slicing of X

* add warning about performance impact of anndata<=0.7

* lint and remove unused code

* improve comment

* lint

* correctly parse versions

* temp files should preserve file suffix if possible - anndata 0.7 compat

* update anndata dependency to 0.6.20

* resolve PR review comments

2020-02-19 09:57:51 -07:00

..

app

anndata X indexing & version compatibility improvements (#1157)

2020-02-19 09:57:51 -07:00

cli

Collect all env vars in one, easy-to-find place (#1149)

2020-02-12 12:50:48 -08:00

gui

Makefile modularity, test targets, and auto-formatting (#1070)

2019-12-27 14:43:37 -08:00

test

anndata X indexing & version compatibility improvements (#1157)

2020-02-19 09:57:51 -07:00

utils

Improve CLI help (#1025)

2019-11-14 13:02:40 -08:00

__init__.py

Version bump to 0.14.0

2020-01-27 16:18:19 -08:00

__main__.py

Makefile modularity, test targets, and auto-formatting (#1070)

2019-12-27 14:43:37 -08:00

Makefile

Collect all env vars in one, easy-to-find place (#1149)

2020-02-12 12:50:48 -08:00

requirements-dev.txt

Add requests 2.22.0 as a server dependency (#1089)

2020-01-03 10:59:46 -08:00

requirements-gui.txt

Installer (#840)

2019-07-12 12:29:22 -07:00

requirements-prepare.txt

merge louvain and prepare extra requires (#897)

2019-08-29 12:49:19 -07:00

requirements.txt

anndata X indexing & version compatibility improvements (#1157)

2020-02-19 09:57:51 -07:00