Sidney Bell 34e5a91dc6 Add calculate_qc_metrics to `prepare (#697) ...

* Calculate QC metrics

* Add QC metrics to prepare section of readme

* Add pointer to scanpy qc metrics function

* Don't explicitly pass qc flag as arg

* Add explicit toggle for run-qc/skip-qc

* Move qc metrics calculation to separate step/function

2019-04-09 08:56:07 -07:00

..

app

Update scanpy version (#688)

2019-04-04 12:16:30 -07:00

cli

Add calculate_qc_metrics to `prepare (#697)

2019-04-09 08:56:07 -07:00

test

Add menu (#631)

2019-03-06 11:56:46 -05:00

__init__.py

Added entry point to run cellxgene from console

2018-07-10 12:56:42 -07:00

__main__.py

Black -- formatter for python (#508)

2018-12-12 09:44:47 -08:00

requirements-dev.txt

Black -- formatter for python (#508)

2018-12-12 09:44:47 -08:00

requirements.txt

Update scanpy version (#688)

2019-04-04 12:16:30 -07:00