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https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-22 07:38:12 +08:00
Matt Weiden
a17fff83cf
* Return empty colors for .cxg v0.0 files Fixes https://github.com/chanzuckerberg/cellxgene/issues/1440 The CxgAdaptor.get_colors method currently assumes that the .cxg file has cxg_group_metadata. As a result, the /api/v0.2/colors endpoint always fails for .cxg v0.0 files. * Add test fixture
21 lines
726 B
Python
21 lines
726 B
Python
import unittest
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from server.common.data_locator import DataLocator
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from server.data_cxg.cxg_adaptor import CxgAdaptor
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from server.test import PROJECT_ROOT, app_config
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from server.test.test_datasets.fixtures import pbmc3k_colors
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class TestCxgAdaptor(unittest.TestCase):
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def test_get_colors(self):
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data = self.get_data("pbmc3k.cxg")
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self.assertDictEqual(data.get_colors(), pbmc3k_colors)
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data = self.get_data("pbmc3k_v0.cxg")
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self.assertDictEqual(data.get_colors(), dict())
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def get_data(self, fixture):
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data_locator = f"{PROJECT_ROOT}/server/test/test_datasets/{fixture}"
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config = app_config(data_locator)
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return CxgAdaptor(DataLocator(data_locator), config)
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