mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-22 16:08:11 +08:00
Madison Dunitz
78c9d24ed4
* move local_server -> backend/server server-> backend/czi_hosted, pull common code into backend/common update imports, tests and make commands
41 lines
1.5 KiB
Python
41 lines
1.5 KiB
Python
import re
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def sanitize_values_in_list(list_of_keys: list):
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"""
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Returns a dictionary mapping of the old keys in the list of `list_of_keys` to its new, clean name that is both
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safe and unique.
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"""
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if not all([isinstance(key, str) for key in list_of_keys]):
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raise Exception("List of keys to sanitize must contain all strings.")
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# Mask out [~/.] and anything outside the ASCII range.
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mask = re.compile(r"[^ -\-0-\[\]-\}]")
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clean_keys_list = [mask.sub("_", key) for key in list_of_keys]
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# Dedupe the clean keys list
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deduped_clean_keys_list = []
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for index, clean_key in enumerate(clean_keys_list):
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total_occurrences_of_clean_key = clean_keys_list.count(clean_key)
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total_occurrences_up_until_current_index = clean_keys_list[:index].count(clean_key)
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deduped_clean_keys_list.append(
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clean_key + "_" + str(total_occurrences_up_until_current_index + 1)
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if total_occurrences_of_clean_key > 1
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else clean_key
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)
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return dict(zip(list_of_keys, deduped_clean_keys_list))
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def sanitize_keys_in_dictionary(dict_to_sanitize: dict):
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"""
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Clean and dedupe the keys in the given dictionary.
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"""
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clean_keys = sanitize_values_in_list(dict_to_sanitize.keys())
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for original_key, sanitized_key in clean_keys.items():
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if original_key != sanitized_key:
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dict_to_sanitize[sanitized_key] = dict_to_sanitize[original_key]
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del dict_to_sanitize[original_key]
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