mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-30 11:28:11 +08:00
Bruce Martin
1ea2b7fe80
* 2211 fixes * lint * lint * add missing test and bug found by test * change terminology for count distribution * update scanpy requirement * update scanpy requirement
25 lines
705 B
Plaintext
25 lines
705 B
Plaintext
anndata>=0.7.6 # we use to_memory(), added in 0.7.6
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boto3>=1.12.18
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click>=7.1.2
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Flask>=1.0.2,<2.0.0 # Flask 2.0 is not compatible with the latest version of Flask-RESTful (0.3.8)
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Flask-Compress>=1.4.0
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Flask-Cors>=3.0.6
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Flask-RESTful>=0.3.6
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flask-server-timing>=0.1.2
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flask-talisman>=0.7.0
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flatbuffers>=1.11.0,<2.0.0 # cellxgene is not compatible with 2.0.0. Requires migration
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flatten-dict>=0.2.0
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fsspec>=0.4.4,<0.8.0
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gunicorn>=20.0.4
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h5py>=3.0.0
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numba>=0.49.1,<0.53.0
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numpy>=1.15.0
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packaging>=20.0
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pandas>=1.0,!=1.1 # pandas 1.1 breaks tests, https://github.com/pandas-dev/pandas/issues/35446
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PyYAML>=5.3
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scipy>=1.0
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requests>=2.22.0
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tiledb>=0.5.9,>=0.6.2,!=0.7.2, !=0.8.6
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s3fs==0.4.2
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sqlalchemy>=1.3.18
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