Bruce Martin 75cb513dd9 re-implement re-embeddings (#1679) ...

* fix mispelling

* re-implement re-embedding

* always load base embedding to fetch counts

* format

* lint

* fix tests

* lint

* fix accept handling

* test log

* more debug

* more

* more

* more

* more

* remove logging

* logging

* jsonify

* remove debugging logs

* lint

* clean up errors a bit

* fix issue found in PR review

* PR review changes

2020-07-30 12:31:36 -07:00

..

app

initial support for corpora schema conventions (#1676)

2020-07-28 17:32:27 -07:00

auth

Add basic authentication in the server (#1670)

2020-07-28 13:28:30 -07:00

cli

refactor config to support different config options for datasets in different dataroots. (#1596)

2020-07-10 16:21:40 -07:00

common

re-implement re-embeddings (#1679)

2020-07-30 12:31:36 -07:00

compute

re-implement re-embeddings (#1679)

2020-07-30 12:31:36 -07:00

converters

initial support for corpora schema conventions (#1676)

2020-07-28 17:32:27 -07:00

data_anndata

re-implement re-embeddings (#1679)

2020-07-30 12:31:36 -07:00

data_common

re-implement re-embeddings (#1679)

2020-07-30 12:31:36 -07:00

data_cxg

initial support for corpora schema conventions (#1676)

2020-07-28 17:32:27 -07:00

eb

Fix eb logging. (#1692)

2020-07-29 16:03:47 -07:00

locust

disable SSL cert verification (#1374)

2020-04-10 12:58:51 -07:00

test

re-implement re-embeddings (#1679)

2020-07-30 12:31:36 -07:00

__init__.py

Fix error handling in plugin module (#1645)

2020-07-17 08:14:10 -07:00

__main__.py

Makefile modularity, test targets, and auto-formatting (#1070)

2019-12-27 14:43:37 -08:00

Makefile

1510-smoke-test (#1548)

2020-06-24 11:45:39 -07:00

requirements-dev.txt

Fix the app config for reembedding and add a test (#1664)

2020-07-23 12:27:53 -07:00

requirements-prepare.txt

merge louvain and prepare extra requires (#897)

2019-08-29 12:49:19 -07:00

requirements.txt

exclude a tiledb version that has a known bug (#1604)

2020-07-07 08:39:50 -07:00