Madison Dunitz af3c6e1d8e config refactor (#1854) ...

* split out config

* add tests for base and app config, refactor client config out of app config

* refactor default config retrieval

* create config test class and helper functions

* move default_config into server to fix import issue

2020-09-29 16:42:46 -05:00

..

app

config refactor (#1854)

2020-09-29 16:42:46 -05:00

auth

config refactor (#1854)

2020-09-29 16:42:46 -05:00

cli

config refactor (#1854)

2020-09-29 16:42:46 -05:00

common

config refactor (#1854)

2020-09-29 16:42:46 -05:00

compute

fix pca call in reembeddings (#1793)

2020-08-25 17:21:39 -07:00

converters

config refactor (#1854)

2020-09-29 16:42:46 -05:00

data_anndata

Refactoring cxg utility classes in preparation for CXG conversion tooling (#1739)

2020-08-14 16:51:13 -07:00

data_common

config refactor (#1854)

2020-09-29 16:42:46 -05:00

data_cxg

Dunitz 1685 hosted annotations (#1789)

2020-08-24 18:26:08 -05:00

db

config refactor (#1854)

2020-09-29 16:42:46 -05:00

eb

config refactor (#1854)

2020-09-29 16:42:46 -05:00

test

config refactor (#1854)

2020-09-29 16:42:46 -05:00

__init__.py

config refactor (#1854)

2020-09-29 16:42:46 -05:00

__main__.py

Makefile modularity, test targets, and auto-formatting (#1070)

2019-12-27 14:43:37 -08:00

default_config.py

config refactor (#1854)

2020-09-29 16:42:46 -05:00

Makefile

Dunitz/db setup (#1619)

2020-08-03 17:54:06 -05:00

requirements-dev.txt

Change psycopg to be binary (#1842)

2020-09-16 14:46:59 -07:00

requirements-prepare.txt

merge louvain and prepare extra requires (#897)

2019-08-29 12:49:19 -07:00

requirements.txt

When reading annotations from tiledb, check if the values are byte literals and if so, decode them. Also pin s3f3 to 0.4.2. (#1788)

2020-08-22 09:42:11 -07:00