Sidney Bell 34e5a91dc6 Add calculate_qc_metrics to `prepare (#697) ...

* Calculate QC metrics

* Add QC metrics to prepare section of readme

* Add pointer to scanpy qc metrics function

* Don't explicitly pass qc flag as arg

* Add explicit toggle for run-qc/skip-qc

* Move qc metrics calculation to separate step/function

2019-04-09 08:56:07 -07:00

..

__init__.py

CLI refactor (#396)

2018-11-02 10:52:50 -04:00

cli.py

bump version (#684)

2019-04-01 14:42:22 -07:00

launch.py

Support diffmap and phate layouts. Explicitly handle embeddings with >2 components. (#662)

2019-03-21 19:06:05 -07:00

prepare.py

Add calculate_qc_metrics to `prepare (#697)

2019-04-09 08:56:07 -07:00