Sidney Bell 9089fc98f2 annotations cli updates (#1190) ...

* Switch logic from `--annotations` to `--disable-annotations

* Rename `--annotations-file` --> `--annotations-input-file` and remove `experimental`

* update docs

* update makefile

* update tests

* Disable annotations on standard client smoke test

* Update docs/posts/annotations.md

Co-Authored-By: Matt Weiden <538456+mweiden@users.noreply.github.com>

* Update docs/posts/annotations.md

* Renaming

* Docs

* Update tests

* Pesky typo -_-

Co-authored-by: Matt Weiden <538456+mweiden@users.noreply.github.com>

2020-03-11 11:57:52 -07:00

..

app

experimental re-embedding (#1186)

2020-03-09 16:53:30 -07:00

cli

annotations cli updates (#1190)

2020-03-11 11:57:52 -07:00

common

annotations cli updates (#1190)

2020-03-11 11:57:52 -07:00

compute

experimental re-embedding (#1186)

2020-03-09 16:53:30 -07:00

converters

Add user-generated annotations tests to the server (#1164)

2020-02-23 15:32:13 -08:00

data_anndata

Use DataLocator consistently on backend (#1208)

2020-03-10 19:12:49 -07:00

data_common

Use DataLocator consistently on backend (#1208)

2020-03-10 19:12:49 -07:00

data_cxg

Use DataLocator consistently on backend (#1208)

2020-03-10 19:12:49 -07:00

eb

Use DataLocator consistently on backend (#1208)

2020-03-10 19:12:49 -07:00

test

annotations cli updates (#1190)

2020-03-11 11:57:52 -07:00

__init__.py

Version bump to 0.14.0

2020-01-27 16:18:19 -08:00

__main__.py

Makefile modularity, test targets, and auto-formatting (#1070)

2019-12-27 14:43:37 -08:00

Makefile

Add codecov for code coverage of python and javascript (#1170)

2020-02-24 17:13:16 -08:00

requirements-dev.txt

Add codecov for code coverage of python and javascript (#1170)

2020-02-24 17:13:16 -08:00

requirements-prepare.txt

merge louvain and prepare extra requires (#897)

2019-08-29 12:49:19 -07:00

requirements.txt

remove pinned tables dependency (#1202)

2020-03-10 07:47:54 -07:00