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101 lines
4.4 KiB
Python
101 lines
4.4 KiB
Python
import unittest
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from server.common.app_config import AppConfig
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from server.common.errors import ConfigurationError
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from server.test import PROJECT_ROOT, test_server, FIXTURES_ROOT
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import requests
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# NOTE, there are more tests that should be written for AppConfig.
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# this is just a start.
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class AppConfigTest(unittest.TestCase):
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def test_update(self):
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c = AppConfig()
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c.update_server_config(app__verbose=True, multi_dataset__dataroot="datadir")
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v = c.server_config.changes_from_default()
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self.assertCountEqual(v, [("app__verbose", True, False), ("multi_dataset__dataroot", "datadir", None)])
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c = AppConfig()
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c.update_default_dataset_config(app__scripts=(), app__inline_scripts=())
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v = c.server_config.changes_from_default()
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self.assertCountEqual(v, [])
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c = AppConfig()
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c.update_default_dataset_config(app__scripts=[], app__inline_scripts=[])
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v = c.default_dataset_config.changes_from_default()
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self.assertCountEqual(v, [])
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c = AppConfig()
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c.update_default_dataset_config(app__scripts=("a", "b"), app__inline_scripts=["c", "d"])
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v = c.default_dataset_config.changes_from_default()
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self.assertCountEqual(v, [("app__scripts", ["a", "b"], []), ("app__inline_scripts", ["c", "d"], [])])
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def test_multi_dataset(self):
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c = AppConfig()
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# test for illegal url_dataroots
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for illegal in ("../b", "!$*", "\\n", "", "(bad)"):
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c.update_server_config(
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multi_dataset__dataroot={"tag": {"base_url": illegal, "dataroot": "{PROJECT_ROOT}/example-dataset"}}
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)
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with self.assertRaises(ConfigurationError):
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c.complete_config()
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# test for legal url_dataroots
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for legal in ("d", "this.is-okay_", "a/b"):
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c.update_server_config(
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multi_dataset__dataroot={"tag": {"base_url": legal, "dataroot": "{PROJECT_ROOT}/example-dataset"}}
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)
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c.complete_config()
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# test that multi dataroots work end to end
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c.update_server_config(
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multi_dataset__dataroot=dict(
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s1=dict(dataroot=f"{PROJECT_ROOT}/example-dataset", base_url="set1/1/2"),
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s2=dict(dataroot=f"{FIXTURES_ROOT}", base_url="set2"),
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s3=dict(dataroot=f"{FIXTURES_ROOT}", base_url="set3"),
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)
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)
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# Change this default to test if the dataroot overrides below work.
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c.update_default_dataset_config(app__about_legal_tos="tos_default.html")
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# specialize the configs for set1
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c.add_dataroot_config(
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"s1", user_annotations__enable=False, diffexp__enable=True, app__about_legal_tos="tos_set1.html"
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)
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# specialize the configs for set2
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c.add_dataroot_config(
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"s2", user_annotations__enable=True, diffexp__enable=False, app__about_legal_tos="tos_set2.html"
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)
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# no specializations for set3 (they get the default dataset config)
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c.complete_config()
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with test_server(app_config=c) as server:
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session = requests.Session()
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r = session.get(f"{server}/set1/1/2/pbmc3k.h5ad/api/v0.2/config")
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data_config = r.json()
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assert data_config["config"]["displayNames"]["dataset"] == "pbmc3k"
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assert data_config["config"]["parameters"]["annotations"] is False
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assert data_config["config"]["parameters"]["disable-diffexp"] is False
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assert data_config["config"]["parameters"]["about_legal_tos"] == "tos_set1.html"
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r = session.get(f"{server}/set2/pbmc3k.cxg/api/v0.2/config")
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data_config = r.json()
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assert data_config["config"]["displayNames"]["dataset"] == "pbmc3k"
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assert data_config["config"]["parameters"]["annotations"] is True
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assert data_config["config"]["parameters"]["about_legal_tos"] == "tos_set2.html"
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r = session.get(f"{server}/set3/pbmc3k.cxg/api/v0.2/config")
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data_config = r.json()
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assert data_config["config"]["displayNames"]["dataset"] == "pbmc3k"
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assert data_config["config"]["parameters"]["annotations"] is True
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assert data_config["config"]["parameters"]["disable-diffexp"] is False
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assert data_config["config"]["parameters"]["about_legal_tos"] == "tos_default.html"
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r = session.get(f"{server}/health")
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assert r.json()["status"] == "pass"
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