mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-24 01:48:13 +08:00
Matt Weiden
ac13b31e13
* Collect all env vars in one, easy-to-find place Past state: * Default environement variables were stored in both client/package.json and client/__tests__/e2e/config.js * Constants that should have been linked--like the cellxgene server port during testing--were repeated. With this commit: * All environment variables are parameterized * All environment variables are packaged in default env files * Move npm scripts to client Makefile * Respond to feedback from @seve and @bkmartinjr
77 lines
1.5 KiB
Makefile
77 lines
1.5 KiB
Makefile
include ../common.mk
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DATASET := $(if $(DATASET),$(DATASET),../example-dataset/pbmc3k.h5ad)
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# Packaging
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.PHONY: clean
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clean:
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rm -rf node_modules
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.PHONY: ci
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ci:
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npm ci client
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.PHONY: install
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install:
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npm install client
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.PHONY: build
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build:
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npm run build
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# Development convenience methods
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.PHONY: server-requirements
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server-requirements:
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virtualenv -p python3 ../venv
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source ../venv/bin/activate && \
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pip install -r ../server/requirements-dev.txt && \
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yes | pip uninstall cellxgene || true && \
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pip install -e ..
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.PHONY: start-frontend
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start-frontend:
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node server/development.js
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.PHONY: start-server
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start-server:
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cellxgene launch -p $(CXG_SERVER_PORT) $(CXG_OPTIONS) $(DATASET)
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.PHONY: backend-dev
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backend-dev: server-requirements
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source ../venv/bin/activate && $(MAKE) start-server
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.PHONY: backend-dev-anno
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backend-dev-anno: server-requirements
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CXG_OPTIONS='--experimental-annotations' $(MAKE) backend-dev
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.PHONY: backend-dev-anno-ontology
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backend-dev-anno-ontology: server-requirements
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CXG_OPTIONS='--experimental-annotations --experimental-annotations-ontology' \
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$(MAKE) backend-dev
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.PHONY: e2e
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e2e:
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node node_modules/jest/bin/jest.js \
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--verbose false \
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--config __tests__/e2e/e2eJestConfig.json \
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e2e/e2e.test.js
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.PHONY: test
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test:
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node node_modules/jest/bin/jest.js
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.PHONY: smoke-test
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smoke-test:
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start_server_and_test '$(MAKE) start-server' $(CXG_SERVER_PORT) '$(MAKE) e2e'
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.PHONY: unit-test
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unit-test:
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node node_modules/jest/bin/jest.js --testPathIgnorePatterns e2e
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# pass remaining commands through to npm run
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%:
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npm run $(*)
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