mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-23 17:08:12 +08:00
Madison Dunitz
78c9d24ed4
* move local_server -> backend/server server-> backend/czi_hosted, pull common code into backend/common update imports, tests and make commands
26 lines
704 B
Plaintext
26 lines
704 B
Plaintext
anndata>=0.7.0
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boto3>=1.12.18
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click>=7.1.2
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fastobo>=0.6.1
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Flask>=1.0.2
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Flask-Compress>=1.4.0
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Flask-Cors>=3.0.6
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Flask-RESTful>=0.3.6
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flask-server-timing>=0.1.2
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flask-talisman>=0.7.0
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flatbuffers>=1.11.0
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flatten-dict>=0.2.0
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fsspec>=0.4.4,<0.8.0
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gunicorn>=20.0.4
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h5py<3.0.0 # h5py>=3.0.0 had a breaking change; there is a fix in anndata>=0.7.5
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numba>=0.49.1,<0.53.0
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numpy>=1.15.0
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packaging>=20.0
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pandas>=1.0,!=1.1 # pandas 1.1 breaks tests, https://github.com/pandas-dev/pandas/issues/35446
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PyYAML>=5.3
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scipy>=1.0
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requests>=2.22.0
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s3fs==0.4.2
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scanpy==1.4.6 # Until we move to anndata 0.7.4 scanpy needs to be pinned here
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umap-learn<0.5.0 # The pinned version scanpy is not compatible with latest umap-learn
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