Files
cellxgene/client/__tests__/util/annoMatrix/whereCache.test.js
Bruce Martin ae30b66123 gene set summary progress (#2127)
* revert removal of cache control headers

* checkpoint work on revising summary route

* add summary query support to annoMatrix

* summarize route cleanup

* add mising file

* clean up summarize route

* add summary histogram

* update deps

* lint

* more lint

* lint

* manage crossfiler during gene set state changes

* remove obsolete debugging code

* correctly perform async watch in histogram

* better error handling
2021-03-30 14:43:53 -07:00

383 lines
8.6 KiB
JavaScript

import sha1 from "sha1";
import {
_whereCacheGet,
_whereCacheCreate,
_whereCacheMerge,
} from "../../../src/annoMatrix/whereCache";
const schema = {};
describe("whereCache", () => {
test("whereCacheGet - where query, missing cache values", () => {
expect(
_whereCacheGet({}, schema, "X", {
where: {
field: "var",
column: "foo",
value: "bar",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet({}, schema, "X", {
summarize: {
field: "var",
column: "foo",
values: ["bar"],
},
})
).toEqual([undefined]);
expect(
_whereCacheGet({ where: { X: {} } }, schema, "X", {
where: {
field: "var",
column: "foo",
value: "bar",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet({ where: { X: { var: new Map() } } }, schema, "X", {
where: {
field: "var",
column: "foo",
value: "bar",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet(
{ where: { X: { var: new Map([["foo", new Map()]]) } } },
schema,
"X",
{
where: {
field: "var",
column: "foo",
value: "bar",
},
}
)
).toEqual([undefined]);
});
test("whereCacheGet - summarize query, missing cache values", () => {
expect(
_whereCacheGet({}, schema, "X", {
summarize: {
method: "mean",
field: "var",
column: "foo",
values: ["bar"],
},
})
).toEqual([undefined]);
expect(
_whereCacheGet(
{ summarize: { X: { mean: { var: new Map() } } } },
schema,
"X",
{
summarize: {
method: "mean",
field: "var",
column: "foo",
values: ["bar"],
},
}
)
).toEqual([undefined]);
});
test("whereCacheGet - varied lookups", () => {
const whereCache = {
where: {
X: {
var: new Map([
[
"foo",
new Map([
["bar", [0]],
["baz", [1, 2]],
]),
],
]),
},
},
summarize: {
X: {
mean: {
var: new Map([
[
"foo",
new Map([
[sha1("bar"), [0]],
[sha1("baz"), [1, 2]],
]),
],
]),
},
},
},
};
expect(
_whereCacheGet(whereCache, schema, "X", {
where: {
field: "var",
column: "foo",
value: "bar",
},
})
).toEqual([0]);
expect(
_whereCacheGet(whereCache, schema, "X", {
summarize: {
method: "mean",
field: "var",
column: "foo",
values: ["bar"],
},
})
).toEqual([0]);
expect(
_whereCacheGet(whereCache, schema, "X", {
where: {
field: "var",
column: "foo",
value: "baz",
},
})
).toEqual([1, 2]);
expect(
_whereCacheGet(whereCache, schema, "X", {
summarize: {
method: "mean",
field: "var",
column: "foo",
values: ["baz"],
},
})
).toEqual([1, 2]);
expect(_whereCacheGet(whereCache, schema, "Y", {})).toEqual([undefined]);
expect(
_whereCacheGet(whereCache, schema, "X", {
where: {
field: "whoknows",
column: "whatever",
value: "snork",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet(whereCache, schema, "X", {
where: {
field: "var",
column: "whatever",
value: "snork",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet(whereCache, schema, "X", {
where: {
field: "var",
column: "foo",
value: "snork",
},
})
).toEqual([undefined]);
});
test("whereCacheCreate, where query", () => {
const query = {
where: {
field: "queryField",
column: "queryColumn",
value: "queryValue",
},
};
const wc = _whereCacheCreate(
"field",
{
where: {
field: "queryField",
column: "queryColumn",
value: "queryValue",
},
},
[0, 1, 2]
);
expect(wc).toBeDefined();
expect(wc).toEqual(
expect.objectContaining({
where: {
field: {
queryField: expect.any(Map),
},
},
})
);
expect(wc.where.field.queryField.has("queryColumn")).toEqual(true);
expect(wc.where.field.queryField.get("queryColumn")).toBeInstanceOf(Map);
expect(
wc.where.field.queryField.get("queryColumn").has("queryValue")
).toEqual(true);
expect(_whereCacheGet(wc, schema, "field", query)).toEqual([0, 1, 2]);
});
test("whereCacheCreate, summarize query", () => {
const query = {
summarize: {
method: "method",
field: "queryField",
column: "queryColumn",
values: ["queryValue"],
},
};
const wc = _whereCacheCreate("field", query, [0, 1, 2]);
expect(_whereCacheGet(wc, schema, "field", query)).toEqual([0, 1, 2]);
});
test("whereCacheCreate, unknown query type", () => {
expect(_whereCacheCreate("field", { foobar: true }, [1])).toEqual({});
});
test("whereCacheMerge, where queries", () => {
let wc;
// remember, will mutate dst
const src = _whereCacheCreate(
"field",
{ where: { field: "queryField", column: "queryColumn", value: "foo" } },
["foo"]
);
const dst1 = _whereCacheCreate(
"field",
{ where: { field: "queryField", column: "queryColumn", value: "bar" } },
["dst1"]
);
wc = _whereCacheMerge(dst1, src);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "foo",
},
})
).toEqual(["foo"]);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "bar",
},
})
).toEqual(["dst1"]);
const dst2 = _whereCacheCreate(
"field",
{ where: { field: "queryField", column: "queryColumn", value: "bar" } },
["dst2"]
);
wc = _whereCacheMerge(dst2, dst1, src);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "foo",
},
})
).toEqual(["foo"]);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "bar",
},
})
).toEqual(["dst1"]);
wc = _whereCacheMerge({}, src);
expect(wc).toEqual(src);
wc = _whereCacheMerge({ where: { field: { queryField: new Map() } } }, src);
expect(wc).toEqual(src);
});
test("whereCacheMerge, mixed queries", () => {
const wc = _whereCacheMerge(
_whereCacheCreate(
"field",
{
where: {
field: "queryField",
column: "queryColumn",
value: "foo",
},
},
["a"]
),
_whereCacheCreate(
"field",
{
summarize: {
method: "mean",
field: "queryField",
column: "queryColumn",
values: ["foo", "bar", "baz"],
},
},
["b"]
)
);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "foo",
},
})
).toEqual(["a"]);
expect(
_whereCacheGet(wc, schema, "field", {
summarize: {
method: "mean",
field: "queryField",
column: "queryColumn",
values: ["foo", "bar", "baz"],
},
})
).toEqual(["b"]);
expect(
_whereCacheGet(wc, schema, "field", {
where: {
field: "queryField",
column: "queryColumn",
value: "does-not-exist",
},
})
).toEqual([undefined]);
expect(
_whereCacheGet(wc, schema, "field", {
summarize: {
method: "no-such-method",
field: "queryField",
column: "queryColumn",
values: ["does-not-exist"],
},
})
).toEqual([undefined]);
});
});