Files
cellxgene/client/src/util/actionHelpers.js
T
Bruce Martin 1269e188be Redux refactor (#1571)
* refactor categorical controls state

* lint

* fix race condition in tests

* fix typo

* add missing update on subset

* remove obsolete code

* update jest and puppeteer major version; update all minors

* update when label changes

* remove lint from tests; increase timeouts in e2e tests

* initial refactoring to new async annomatrix

* refine error handling

* fix bad merge

* add continuous legend

* lint

* fix memoization in color table creators

* partial implementation of user defined annotations

* add new annotations action creator file

* first pass at user annotations

* additional user annotation bug fixes

* user annotation auto-save

* unit test cleanup

* lint

* refactor into multiple files

* cleanup

* add column GC

* fix several bugs in user annotations

* remove debug code

* no anonymous functions

* undo redo cleanup

* file cleanup

* scatterplot

* performance

* cleanup

* remove old code

* render in parallel with load

* fix race condition

* simply graph rendering

* render throttle DRY

* fix category label order

* fix typo in e2e test setup

* re-fix the e2e test setup

* be more tolerant of races

* anno matrix unit tests

* temp disable reembedding

* pilot port continuous histo to react-async

* name change

* lint

* fix repaint bug

* typo fix

* update snap to match new ids

* world/universe name cleanup

* move annoMatrix to src dir

* use private underscore naming convention

* fix corner case in all selected

* name cleanup

* add layout control

* init edge case

* lint

* port scatterplot

* fix label indexing bug and improve tests

* port category to react-async

* fix user annotation labelling while subset

* select all of prev layout on layout switch

* fix race with crossfilter update

* prettier lint

* fix misleading comment

* fix url composition in loader

* first pass at crossfilter tests

* lint

* lint

* fix typo

* improved error handling for network errors

* fix memoization bug

* add memo

* refactor for performnce

* add missing single-value handling in select exact parser

* small bugs discovered by tests

* lint

* additional crossfilter unit tests

* remove extraneous comment

* add support for automatic category determination

* lint

* fix render bug in category

* take advantage of schema categories guarantee

* lint

* do not clear history when resetting

* enhanced annomatrix gc

* lint

* finish renaming to follow conventions; fix clone race bug

* lint

* add priority based loading to improve initial data load UX

* crossfilter cache perf

* perf tuning

* remove timers

* documentation

* PR review changes

* PR review changes

* more PR review edits

* improve clarity of comment

* more PR review fixes

* port centroidLabels to use react-async

* remove dead code

* pr review updates

* oops, remove logging
2020-07-14 13:53:33 -07:00

130 lines
3.2 KiB
JavaScript

import _ from "lodash";
/* XXX: cough, cough, ... */
import { postNetworkErrorToast } from "../components/framework/toasters";
/*
dispatch an action error to the user. Currently we use
async toasts.
*/
let networkErrorToastKey = null;
export const dispatchNetworkErrorMessageToUser = (message) => {
if (!networkErrorToastKey) {
networkErrorToastKey = postNetworkErrorToast(message);
} else {
postNetworkErrorToast(message, networkErrorToastKey);
}
};
/*
Catch unexpected errors and make sure we don't lose them!
*/
export function catchErrorsWrap(fn, dispatchToUser = false) {
return (dispatch, getState) => {
fn(dispatch, getState).catch((error) => {
console.error(error);
if (dispatchToUser) {
dispatchNetworkErrorMessageToUser(error.message);
}
dispatch({ type: "UNEXPECTED ERROR", error });
});
};
}
/*
Wrapper to perform async fetch with some modest error handling
and decoding.
*/
const doFetch = async (url, acceptType) => {
try {
const res = await fetch(url, {
method: "get",
headers: new Headers({
Accept: acceptType,
}),
credentials: "include",
});
if (res.ok && res.headers.get("Content-Type").includes(acceptType)) {
return res;
}
// else an error
const msg = `Unexpected HTTP response ${res.status}, ${res.statusText}`;
dispatchNetworkErrorMessageToUser(msg);
throw new Error(msg);
} catch (e) {
// network error
const msg = "Unexpected HTTP error";
dispatchNetworkErrorMessageToUser(msg);
throw e;
}
};
/*
Wrapper to perform an async fetch and JSON decode response.
*/
export const doJsonRequest = async (url) => {
const res = await doFetch(url, "application/json");
return res.json();
};
/*
Wrapper to perform an async fetch for binary data.
*/
export const doBinaryRequest = async (url) => {
const res = await doFetch(url, "application/octet-stream");
return res.arrayBuffer();
};
/*
This function "packs" filter index lists into the more efficient
"range" form specified in the REST 0.2 spec.
Specifically, it turns an array of indices [0, 1, 2, 10, 11, 14, ...]
into a form that encodes runs of consecutive numbers as [min, max].
Array may not be sorted, but will only contain uniq values.
Parameters:
indices - input array of numbers (index)
minRangeLength - hint, min range length before it is encoded into range format.
sorted - boolean hint indicating array is presorted, ascending order
So [1, 2, 3, 4, 10, 11, 14] -> [ [1, 4], [10, 11], 14]
*/
export const rangeEncodeIndices = (
indices,
minRangeLength = 3,
sorted = false
) => {
if (indices.length === 0) {
return indices;
}
if (!sorted) {
indices = _.sortBy(indices);
}
const result = new Array(indices.length);
let resultTail = 0;
let i = 0;
while (i < indices.length) {
const begin = indices[i];
let current;
do {
current = indices[i];
i += 1;
} while (i < indices.length && indices[i] === current + 1);
if (current - begin + 1 >= minRangeLength) {
result[resultTail] = [begin, current];
resultTail += 1;
} else {
for (let j = begin; j <= current; j += 1, resultTail += 1) {
result[resultTail] = j;
}
}
}
result.length = resultTail;
return result;
};