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r752: option to copy comments to output (#136)
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@@ -370,6 +370,9 @@ SAM read group line in a format like
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.B @RG\\\\tID:foo\\\\tSM:bar
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[].
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.TP
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.B -y
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Copy input FASTA/Q comments to output.
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.TP
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.B -c
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Generate CIGAR. In PAF, the CIGAR is written to the `cg' custom tag.
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.TP
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