r752: option to copy comments to output (#136)

This commit is contained in:
Heng Li
2018-03-23 10:04:33 -04:00
parent 8766d286df
commit 08bd2123b6
8 changed files with 37 additions and 12 deletions
+3
View File
@@ -370,6 +370,9 @@ SAM read group line in a format like
.B @RG\\\\tID:foo\\\\tSM:bar
[].
.TP
.B -y
Copy input FASTA/Q comments to output.
.TP
.B -c
Generate CIGAR. In PAF, the CIGAR is written to the `cg' custom tag.
.TP