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r1028: backport minigraph -U

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Heng Li
2021-05-01 15:41:39 -04:00
parent e8823a3709
commit 0f5608c4a4
4 changed files with 11 additions and 5 deletions
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main.c
+5 -2
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@@ -7,7 +7,7 @@
#include "mmpriv.h"
#include "ketopt.h"
#define MM_VERSION "2.18-r1027-dirty"
#define MM_VERSION "2.18-r1028-dirty"
#ifdef __linux__
#include <sys/resource.h>
@@ -108,7 +108,7 @@ static inline void yes_or_no(mm_mapopt_t *opt, int flag, int long_idx, const cha
int main(int argc, char *argv[])
{
const char *opt_str = "2aSDw:k:K:t:r:f:Vv:g:G:I:d:XT:s:x:Hcp:M:n:z:A:B:O:E:m:N:Qu:R:hF:LC:yYPo:e:";
const char *opt_str = "2aSDw:k:K:t:r:f:Vv:g:G:I:d:XT:s:x:Hcp:M:n:z:A:B:O:E:m:N:Qu:R:hF:LC:yYPo:e:U:";
ketopt_t o = KETOPT_INIT;
mm_mapopt_t opt;
mm_idxopt_t ipt;
@@ -248,6 +248,9 @@ int main(int argc, char *argv[])
} else if (c == 'V') {
puts(MM_VERSION);
return 0;
} else if (c == 'U') {
opt.min_mid_occ = strtol(o.arg, &s, 10);
if (*s == ',') opt.max_mid_occ = strtol(s + 1, &s, 10);
} else if (c == 'f') {
double x;
char *p;