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r112: output z-drop

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Heng Li
2017-06-29 22:08:46 -04:00
parent 3825feeeac
commit 11167f511b
5 changed files with 22 additions and 16 deletions
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minimap.h
+2 -2
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@@ -54,13 +54,13 @@ typedef struct {
typedef struct {
int32_t id;
uint32_t cnt:30, rev:1, split:1;
uint32_t cnt:31, rev:1;
uint32_t rid:31, rep:1;
int32_t score;
int32_t qs, qe, rs, re;
int32_t parent, subsc;
int32_t as;
uint32_t mapq:8, n_sub:24; // TODO: n_sub is not used for now
uint32_t mapq:8, split:2, n_sub:22; // TODO: n_sub is not used for now
mm_extra_t *p;
} mm_reg1_t;