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r1207: reduced cap_kalloc from 1G to 500M

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This reduces the peak memory.
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Heng Li
2024-03-20 15:53:12 -04:00
parent 89d4d219cd
commit 119bdc6029
2 changed files with 2 additions and 2 deletions
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minimap.h
+1 -1
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@@ -5,7 +5,7 @@
#include <stdio.h> #include <stdio.h>
#include <sys/types.h> #include <sys/types.h>
#define MM_VERSION "2.27-r1206-dirty" #define MM_VERSION "2.27-r1207-dirty"
#define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit #define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit
#define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name #define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name
options.c
+1 -1
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@@ -55,7 +55,7 @@ void mm_mapopt_init(mm_mapopt_t *opt)
opt->max_clip_ratio = 1.0f; opt->max_clip_ratio = 1.0f;
opt->mini_batch_size = 500000000; opt->mini_batch_size = 500000000;
opt->max_sw_mat = 100000000; opt->max_sw_mat = 100000000;
opt->cap_kalloc = 1000000000; opt->cap_kalloc = 500000000;
opt->rank_min_len = 500; opt->rank_min_len = 500;
opt->rank_frac = 0.9f; opt->rank_frac = 0.9f;