r224: inversion alignment around Z-drop break

This commit is contained in:
Heng Li
2017-07-29 13:09:10 -04:00
parent 120bebc290
commit 19d6ec885e
7 changed files with 60 additions and 30 deletions
+1 -1
View File
@@ -31,7 +31,7 @@ void mm_mapopt_init(mm_mapopt_t *opt)
opt->a = 2, opt->b = 4, opt->q = 4, opt->e = 2, opt->q2 = 24, opt->e2 = 1;
opt->zdrop = 400;
opt->min_dp_max = opt->min_chain_score;
opt->min_dp_max = opt->min_chain_score * opt->a;
opt->min_ksw_len = 200;
}