backup manuscript

This commit is contained in:
Heng Li
2017-08-24 22:05:14 +08:00
parent b8bdac7e64
commit 240f6caaff
3 changed files with 129 additions and 80 deletions
+1 -1
View File
@@ -94,7 +94,7 @@ while (file.readline(buf) >= 0) {
ori_qlen = parseInt(t[1]);
} else { // SAM
var flag = parseInt(t[1]);
if (flag & 4) continue;
if ((flag & 4) || t[2] == '*' || t[5] == '*') continue;
if (flag & 0x100) {
++n_2nd;
continue;