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r216: a bit cleanup; identical output to r215

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Heng Li
2017-07-28 11:54:18 -04:00
parent fc965805f7
commit 254280b8af
5 changed files with 14 additions and 7 deletions
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hit.c
+1 -1
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@@ -266,7 +266,7 @@ void mm_join_long(void *km, const mm_mapopt_t *opt, int qlen, int *n_regs_, mm_r
if (r1->re - r1->rs < max_gap>>1 || r1->qe - r1->qs < max_gap>>1) continue;
// all conditions satisfied; join
a[r1->as].y |= 1ULL<<40;
a[r1->as].y |= MM_SEED_LONG_JOIN;
r0->cnt += r1->cnt, r0->score += r1->score;
mm_reg_set_coor(r0, qlen, a);
r1->cnt = 0;