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output cigar

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Heng Li
2017-06-23 22:53:47 -04:00
parent 35b84f88c6
commit 2987be288c
2 changed files with 8 additions and 4 deletions
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align.c
+2 -3
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@@ -63,9 +63,8 @@ static void mm_append_cigar(mm_reg1_t *r, uint32_t n_cigar, uint32_t *cigar) //
if (r->p == 0) {
uint32_t capacity = n_cigar + sizeof(mm_extra_t);
kroundup32(capacity);
r->p = (mm_extra_t*)malloc(capacity * 4);
r->p->n_cigar = 0, r->p->capacity = capacity;
r->p->n_diff = r->p->n_ambi = 0;
r->p = (mm_extra_t*)calloc(capacity, 4);
r->p->capacity = capacity;
} else if (r->p->n_cigar + n_cigar + sizeof(mm_extra_t) > r->p->capacity) {
r->p->capacity = r->p->n_cigar + n_cigar + sizeof(mm_extra_t);
kroundup32(r->p->capacity);