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r685: tune end seed filter again

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Heng Li
2018-02-05 11:48:22 -05:00
parent dbf284b2d9
commit 29b4a1786c
5 changed files with 4 additions and 7 deletions
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python/cmappy.pxd
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@@ -30,7 +30,6 @@ cdef extern from "minimap.h":
int end_bonus
int min_dp_max
int min_ksw_len
int min_end_match;
int anchor_ext_len, anchor_ext_shift
int pe_ori, pe_bonus
float mid_occ_frac