r1049: removed the long-join heuristics

2026-09-20 11:07:57 +08:00 · 2021-05-24 16:21:40 -04:00
parent 4f91558160
commit 379728726a
7 changed files with 5 additions and 78 deletions
--- a/python/cmappy.pxd
+++ b/python/cmappy.pxd
@@ -30,10 +30,6 @@ cdef extern from "minimap.h":
 		float pri_ratio
 		int best_n

-		int max_join_long, max_join_short
-		int min_join_flank_sc
-		float min_join_flank_ratio
-
 		float alt_drop

 		int a, b, q, e, q2, e2