fork/minimap2
1
0
Fork 0
mirror of https://github.com/lh3/minimap2.git synced 2026-09-27 08:18:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

r129: fixed memory leak caused by qualities

Browse Source
This commit is contained in:
Heng Li
2017-06-30 23:48:00 -04:00
parent 10910b72d1
commit 41efd03d7a
6 changed files with 24 additions and 8 deletions
Download Patch File Download Diff File Expand all files Collapse all files
map.c
+2 -1
View File
@@ -304,7 +304,7 @@ static void *worker_pipeline(void *shared, int step, void *in)
if (step == 0) { // step 0: read sequences
step_t *s;
s = (step_t*)calloc(1, sizeof(step_t));
s->seq = bseq_read(p->fp, p->mini_batch_size, &s->n_seq);
s->seq = bseq_read(p->fp, p->mini_batch_size, !!(p->opt->flag & MM_F_OUT_SAM), &s->n_seq);
if (s->seq) {
s->p = p;
for (i = 0; i < s->n_seq; ++i)
@@ -339,6 +339,7 @@ static void *worker_pipeline(void *shared, int step, void *in)
}
free(s->reg[i]);
free(s->seq[i].seq); free(s->seq[i].name);
if (s->seq[i].qual) free(s->seq[i].qual);
}
free(s->reg); free(s->n_reg); free(s->seq);
if (mm_verbose >= 3)