r129: fixed memory leak caused by qualities

This commit is contained in:
Heng Li
2017-06-30 23:48:00 -04:00
parent 10910b72d1
commit 41efd03d7a
6 changed files with 24 additions and 8 deletions
+17 -2
View File
@@ -5,7 +5,7 @@
minimap2 - mapping and alignment between collections of DNA sequences
.SH SYNOPSIS
* Index the target sequences (optional):
* Indexing the target sequences (optional):
.RS 4
minimap2
.RB [ -H ]
@@ -13,12 +13,14 @@ minimap2
.IR kmer ]
.RB [ -w
.IR miniWinSize ]
.RB [ -I
.IR batchSize ]
.B -d
.I target.mmi
.I target.fa
.RE
* Align with CIGAR:
* Long-read alignment with CIGAR:
.RS 4
minimap2
.B -b
@@ -43,6 +45,19 @@ minimap2
.I output.paf
.RE
* Long read overlap without CIGAR:
.RS 4
minimap2
.B -x
.R ava10k
.RB [ -t
.IR nThreads ]
.I target.fa
.I query.fa
>
.I output.paf
.RE
.SH DESCRIPTION
.PP
Minimap2 is a fast sequence mapping and alignment program that can find