r670: added PE support to mappy

and minor code cleanup
This commit is contained in:
Heng Li
2018-01-31 11:33:08 -05:00
parent 12a5a5fa3c
commit 46d6349af4
9 changed files with 71 additions and 23 deletions
+2 -2
View File
@@ -23,7 +23,7 @@ def readme():
setup(
name = 'mappy',
version = '2.7',
version = '2.8',
url = 'https://github.com/lh3/minimap2',
description = 'Minimap2 python binding',
long_description = readme(),
@@ -39,7 +39,7 @@ setup(
depends = ['minimap.h', 'bseq.h', 'kalloc.h', 'kdq.h', 'khash.h', 'kseq.h', 'ksort.h',
'ksw2.h', 'kthread.h', 'kvec.h', 'mmpriv.h', 'sdust.h',
'python/cmappy.h', 'python/cmappy.pxd'],
extra_compile_args = ['-msse4'], # WARNING: ancient x86_64 CPUs don't have SSE4
extra_compile_args = ['-DHAVE_KALLOC', '-msse4'], # WARNING: ancient x86_64 CPUs don't have SSE4
include_dirs = ['.'],
libraries = ['z', 'm', 'pthread'])],
classifiers = [