fork/minimap2
1
0
Fork 0
mirror of https://github.com/lh3/minimap2.git synced 2026-10-05 08:28:13 +08:00
Code Issues Packages Projects Releases Wiki Activity

r1236: support paired-end short-read RNA-seq

Browse Source
This commit is contained in:
Heng Li
2025-03-30 19:30:19 -04:00
parent ce30004e02
commit 4b8b4418df
3 changed files with 18 additions and 3 deletions
Download Patch File Download Diff File Expand all files Collapse all files
minimap.h
+2 -1
View File
@@ -5,7 +5,7 @@
#include <stdio.h>
#include <sys/types.h>
#define MM_VERSION "2.28-r1235-dirty"
#define MM_VERSION "2.28-r1236-dirty"
#define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit
#define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name
@@ -45,6 +45,7 @@
#define MM_F_SPLICE_OLD (0x800000000LL)
#define MM_F_SECONDARY_SEQ (0x1000000000LL) //output SEQ field for seqondary alignments using hard clipping
#define MM_F_OUT_DS (0x2000000000LL)
#define MM_F_PE_IND (0x4000000000LL)
#define MM_I_HPC 0x1
#define MM_I_NO_SEQ 0x2