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r108: refactoring, move reg1 routines to hit.c

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Heng Li
2017-06-29 19:44:11 -04:00
parent ecedfe5788
commit 4cd456b9ba
6 changed files with 30 additions and 44 deletions
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hit.c
+17
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@@ -22,6 +22,23 @@ mm_reg1_t *mm_gen_regs(int qlen, int n_u, uint64_t *u, mm128_t *a) // convert ch
return r;
}
void mm_split_reg(mm_reg1_t *r, mm_reg1_t *r2, int n, int qlen, mm128_t *a)
{
if (n <= 0 || n >= r->cnt) return;
*r2 = *r;
r2->id = -1;
r2->p = 0;
r2->cnt = r->cnt - n;
r2->score = (int32_t)(r->score * ((float)r2->cnt / r->cnt) + .499);
r2->as = r->as + n;
if (r->parent == r->id) r2->parent = MM_PARENT_TMP_PRI;
mm_reg_set_coor(r2, qlen, a);
r->cnt -= r2->cnt;
r->score -= r2->score;
mm_reg_set_coor(r, qlen, a);
r->split = r2->split = 1;
}
void mm_set_parent(void *km, float mask_level, int n, mm_reg1_t *r) // and compute mm_reg1_t::subsc
{
int i, j, k, *w;