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r288: changed max intron length to 200k

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Heng Li
2017-08-12 12:39:21 -04:00
parent d240318741
commit 5a74088b74
2 changed files with 4 additions and 4 deletions
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main.c
+2 -2
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@@ -8,7 +8,7 @@
#include "minimap.h"
#include "mmpriv.h"
#define MM_VERSION "2.0-r287-dirty"
#define MM_VERSION "2.0-r288-dirty"
void liftrlimit()
{
@@ -140,7 +140,7 @@ int main(int argc, char *argv[])
} else if (strcmp(optarg, "splice") == 0 || strcmp(optarg, "cdna") == 0) {
k = 15, w = 5;
opt.flag |= MM_F_SPLICE;
opt.max_gap = 2000, opt.max_gap_ref = opt.bw = 100000;
opt.max_gap = 2000, opt.max_gap_ref = opt.bw = 200000;
opt.a = 1, opt.b = 2, opt.q = 2, opt.e = 1, opt.q2 = 32, opt.e2 = 0;
opt.zdrop = 200;
} else {