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r750: check puts() return (#132 & #103)

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Heng Li
2018-03-22 11:31:58 -04:00
parent 18659118cd
commit 623b5d9d48
5 changed files with 24 additions and 7 deletions
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map.c
+3 -3
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@@ -489,11 +489,11 @@ static void *worker_pipeline(void *shared, int step, void *in)
mm_write_sam2(&p->str, mi, t, i - seg_st, j, s->n_seg[k], &s->n_reg[seg_st], (const mm_reg1_t*const*)&s->reg[seg_st], km, p->opt->flag);
else
mm_write_paf(&p->str, mi, t, r, km, p->opt->flag);
puts(p->str.s);
mm_err_puts(p->str.s);
}
if (s->n_reg[i] == 0 && (p->opt->flag & MM_F_OUT_SAM)) {
if (s->n_reg[i] == 0 && (p->opt->flag & MM_F_OUT_SAM)) { // write an unmapped record
mm_write_sam2(&p->str, mi, t, i - seg_st, -1, s->n_seg[k], &s->n_reg[seg_st], (const mm_reg1_t*const*)&s->reg[seg_st], km, p->opt->flag);
puts(p->str.s);
mm_err_puts(p->str.s);
}
}
for (i = seg_st; i < seg_en; ++i) {